RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 LCN12Q6JVE5 192 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 MOGAT3Q86VF5 341 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 GNB4Q9HAV0 340 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 YTHDF2Q9Y5A9 579 aaKnown RBP9.67□□□□□ -0.86
SOX9-201ENST00000245479 RELNP78509 3460 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 OR4C46A6NHA9 309 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 ZNF207O43670 478 aaKnown RBP9.67□□□□□ -0.86
SOX9-201ENST00000245479 SMPD2O60906 423 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 CT45A6P0DMU7 189 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 CT45A5P0DMU8 189 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 CT45A7P0DMV0 189 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 BPIFB3P59826 476 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 ARL16Q0P5N6 197 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 FOXL1Q12952 345 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 KCNMB1Q16558 191 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 ACSF3Q4G176 576 aaPredicted RBP9.67□□□□□ -0.86
SOX9-201ENST00000245479 CT45A1Q5HYN5 189 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 Q6ZRM9 215 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 ZBTB34Q8NCN2 500 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 CT45A3Q8NHU0 189 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 A0A1W2PNU3 283 aaPredicted RBP9.66□□□□□ -0.86
SOX9-201ENST00000245479 ENSAO43768 121 aaKnown RBP9.66□□□□□ -0.86
SOX9-201ENST00000245479 HAND1O96004 215 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 LINC00869P0C866 280 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 COL8A2P25067 703 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 GNB1P62873 340 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 ERHP84090 104 aaKnown RBP9.66□□□□□ -0.86
SOX9-201ENST00000245479 PET117Q6UWS5 81 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 MRPL52Q86TS9 123 aaKnown RBP9.66□□□□□ -0.86
SOX9-201ENST00000245479 TMEM70Q9BUB7 260 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 SPRR3Q9UBC9 169 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 CDC42EP3Q9UKI2 254 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 PSG7Q13046 419 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 LHFPL4Q7Z7J7 247 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 ABHD12Q8N2K0 398 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 RPRMLQ8N4K4 120 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 FAM122AQ96E09 287 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 AGMATQ9BSE5 352 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 REPIN1Q9BWE0 567 aaKnown RBP9.66□□□□□ -0.86
SOX9-201ENST00000245479 PEF1Q9UBV8 284 aaKnown RBP9.66□□□□□ -0.86
SOX9-201ENST00000245479 TRAV24A0A0B4J272 114 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 LYG1Q8N1E2 194 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 ORAOV1Q8WV07 137 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 HSPB7Q9UBY9 170 aa9.66□□□□□ -0.86
SOX9-201ENST00000245479 IGKV1-6A0A0C4DH72 117 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 CA2P00918 260 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 HIST1H1EP10412 219 aaKnown RBP9.65□□□□□ -0.86
SOX9-201ENST00000245479 TIMP3P35625 211 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 Q6ZWC4 215 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 LYPD6Q86Y78 171 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 OR8A1Q8NGG7 326 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 KLF14Q8TD94 323 aaPredicted RBP9.65□□□□□ -0.86
SOX9-201ENST00000245479 LOXL4Q96JB6 756 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 RNASE7Q9H1E1 156 aaKnown RBP9.65□□□□□ -0.86
SOX9-201ENST00000245479 MEGF9Q9H1U4 602 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 RRHO14718 337 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 PSPNO60542 156 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 CSN1S1P47710 185 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 CCL17Q92583 94 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 TMEM45BQ96B21 275 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 FGF23Q9GZV9 251 aaPredicted RBP9.65□□□□□ -0.86
SOX9-201ENST00000245479 TANC2Q9HCD6 1990 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 OOEPA6NGQ2 149 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 ZNF726P1Q15940 193 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 SMIM21Q3B7S5 101 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 ZNRD1Q9P1U0 126 aa9.65□□□□□ -0.86
SOX9-201ENST00000245479 USP9YO00507 2555 aaPredicted RBP9.65□□□□□ -0.87
SOX9-201ENST00000245479 TRAV9-2A0A087WT02 112 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 IGLV3-32A0A0A0MS00 114 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 IL18BPO95998 194 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 CGAP01215 116 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 C3orf79P0CE67 100 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 CT45A10P0DMU9 189 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 GFRA1P56159 465 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 MZT1Q08AG7 82 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 PLGLAQ15195 96 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 AMMECR1LQ6DCA0 310 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 ZNF430Q9H8G1 570 aaPredicted RBP9.64□□□□□ -0.87
SOX9-201ENST00000245479 ZNF355PQ9NSJ1 428 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 HSPB8Q9UJY1 196 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 HBZP02008 142 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 CYC1P08574 325 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 CTSSP25774 331 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 LINC00596Q86U02 117 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 STPG4Q8N801 248 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 SGK494Q96LW2 274 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 IL36GQ9NZH8 169 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 IGHV3-72A0A0B4J1Y9 119 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 ITGB1BP1O14713 200 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 CLDN14O95500 239 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 P01737 135 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 SUB1P53999 127 aaKnown RBP eCLIP9.64□□□□□ -0.87
SOX9-201ENST00000245479 PRSS8Q16651 343 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 RPL39P5Q59GN2 51 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 COA6Q5JTJ3 125 aaKnown RBP9.64□□□□□ -0.87
SOX9-201ENST00000245479 Q6ZVH6 145 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 ZNF645Q8N7E2 425 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 CCDC168Q8NDH2 2452 aa9.64□□□□□ -0.87
SOX9-201ENST00000245479 KIR2DL5BA0A0G2JN68 375 aa9.63□□□□□ -0.87
SOX9-201ENST00000245479 KIR2DL5BA0A0G2JPC4 375 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms