RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 FABP1P07148 127 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 SAA1P0DJI8 122 aaPredicted RBP10.37□□□□□ -0.75
HIF3A-201ENST00000244302 IGHV4-31P0DP07 118 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 NQO2P16083 231 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 SAA4P35542 130 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 PAX9P55771 341 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 RELBQ01201 579 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 KLF17Q5JT82 389 aaPredicted RBP10.37□□□□□ -0.75
HIF3A-201ENST00000244302 AKR1C8PQ5T2L2 129 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 OR5C1Q8NGR4 320 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 FAM216AQ8WUB2 273 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 C22orf15Q8WYQ4 148 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 HARBI1Q96MB7 349 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 ATP5SQ99766 215 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 OR51M1Q9H341 326 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 TRAV1-1A0A0B4J248 108 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 RBFOX2O43251 390 aaKnown RBP eCLIP10.37□□□□□ -0.75
HIF3A-201ENST00000244302 SRP19P09132 144 aaKnown RBP10.37□□□□□ -0.75
HIF3A-201ENST00000244302 OR8U8P0C7N1 319 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 S100PP25815 95 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 DYNLT3P51808 116 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 TMEM249Q2WGJ8 235 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 KHDC3LQ587J8 217 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 FLYWCH2Q96CP2 140 aaKnown RBP10.37□□□□□ -0.75
HIF3A-201ENST00000244302 ADTRPQ96IZ2 230 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 TMPRSS5Q9H3S3 457 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 PUS1Q9Y606 427 aaKnown RBP eCLIP10.37□□□□□ -0.75
HIF3A-201ENST00000244302 RFNGQ9Y644 331 aa10.37□□□□□ -0.75
HIF3A-201ENST00000244302 CST7O76096 145 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 UBE2E1P51965 193 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 TAS2R30P59541 319 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 RTL8BQ17RB0 113 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 MRGPRG-AS1Q2M3A8 158 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 RBMS3Q6XE24 437 aaKnown RBP10.36□□□□□ -0.75
HIF3A-201ENST00000244302 SLC35E3Q7Z769 313 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 STX12Q86Y82 276 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 CFHR4Q92496 578 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 B4DEV8 164 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 H3BQ15 152 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 SLC25A17O43808 307 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 SCAF4O95104 1147 aaKnown RBP10.36□□□□□ -0.75
HIF3A-201ENST00000244302 IL3RAP26951 378 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 LGALS4P56470 323 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 RPL23AP62750 156 aaKnown RBP10.36□□□□□ -0.75
HIF3A-201ENST00000244302 LOXL1Q08397 574 aaPredicted RBP10.36□□□□□ -0.75
HIF3A-201ENST00000244302 C10orf55Q5SWW7 151 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 SLC16A13Q7RTY0 426 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 TCTEX1D1Q8N7M0 179 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 LINC01356Q8N9X3 169 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 TVP23CQ96ET8 276 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 RAB40CQ96S21 281 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 RARRES2Q99969 163 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 RBKSQ9H477 322 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 WASHC3Q9Y3C0 194 aa10.36□□□□□ -0.75
HIF3A-201ENST00000244302 FCN1O00602 326 aa10.35□□□□□ -0.75
HIF3A-201ENST00000244302 IGKV1D-33P01593 117 aa10.35□□□□□ -0.75
HIF3A-201ENST00000244302 IGKV1-33P01594 117 aa10.35□□□□□ -0.75
HIF3A-201ENST00000244302 APOA2P02652 100 aa10.35□□□□□ -0.75
HIF3A-201ENST00000244302 ICAM4Q14773 271 aa10.35□□□□□ -0.75
HIF3A-201ENST00000244302 TMEM177Q53S58 311 aa10.35□□□□□ -0.75
HIF3A-201ENST00000244302 LURAP1LQ8IV03 231 aa10.35□□□□□ -0.75
HIF3A-201ENST00000244302 TMEM217Q8N7C4 229 aa10.35□□□□□ -0.75
HIF3A-201ENST00000244302 NIPSNAP3BQ9BS92 247 aa10.35□□□□□ -0.75
HIF3A-201ENST00000244302 NIT2Q9NQR4 276 aa10.35□□□□□ -0.75
HIF3A-201ENST00000244302 GSN-AS1Q9NRJ2 163 aa10.35□□□□□ -0.75
HIF3A-201ENST00000244302 NAV3Q8IVL0 2385 aa10.35□□□□□ -0.75
HIF3A-201ENST00000244302 NPFFO15130 113 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 VENTXO95231 258 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 IFNA5P01569 189 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 IL6RP08887 468 aaPredicted RBP10.34□□□□□ -0.75
HIF3A-201ENST00000244302 KIR2DS2P43631 304 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 UBE2KP61086 200 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 CCL20P78556 96 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 FAM71F2Q6NXP2 309 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 OR4C13Q8NGP0 309 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.34□□□□□ -0.75
HIF3A-201ENST00000244302 WSB1Q9Y6I7 421 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 MTORP42345 2549 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 A0A0U1RQK1 487 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 MDFIC2A0A1B0GVS7 189 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 CLN5O75503 358 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 APELAP0DMC3 54 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 TAGLN2P37802 199 aaKnown RBP10.34□□□□□ -0.75
HIF3A-201ENST00000244302 TNFRSF9Q07011 255 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 ZNF429Q86V71 674 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 PDPNQ86YL7 162 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 BCL6BQ8N143 479 aaPredicted RBP10.34□□□□□ -0.75
HIF3A-201ENST00000244302 OR4A16Q8NH70 328 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 C1orf159Q96HA4 380 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 HINT2Q9BX68 163 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 AMMECR1Q9Y4X0 333 aaPredicted RBP10.34□□□□□ -0.75
HIF3A-201ENST00000244302 BAHCC1Q9P281 2608 aa10.34□□□□□ -0.75
HIF3A-201ENST00000244302 A0A1B0GV50 99 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 TGOLN2O43493 480 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 SYNGR2O43760 224 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 HOXA5P20719 270 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 ERVK-16P61578 105 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 PNRC1Q12796 327 aaPredicted RBP10.33□□□□□ -0.76
HIF3A-201ENST00000244302 OR10W1Q8NGF6 305 aa10.33□□□□□ -0.76
HIF3A-201ENST00000244302 FBXL15Q9H469 300 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms