RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 SYNGR3O43761 229 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 TIMP3P35625 211 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 RIPPLY3P57055 190 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 ABHD12Q8N2K0 398 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 LPAR2Q9HBW0 351 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 NHP2Q9NX24 153 aaKnown RBP6.97□□□□□ -1.29
APOB-201ENST00000233242 MRPL27Q9P0M9 148 aaKnown RBP6.97□□□□□ -1.29
APOB-201ENST00000233242 NPIPB11E5RHQ5 1161 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 TM4SF5O14894 197 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 FAM214BQ7L5A3 538 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 FAM89BQ8N5H3 189 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 OR52E5Q8NH55 327 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 LINC00271P0C7V0 271 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 REG1BP48304 166 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 TSKUQ8WUA8 353 aa6.97□□□□□ -1.29
APOB-201ENST00000233242 LEPP41159 167 aa6.96□□□□□ -1.29
APOB-201ENST00000233242 COL24A1Q17RW2 1714 aa6.96□□□□□ -1.29
APOB-201ENST00000233242 DNASE2BQ8WZ79 361 aa6.96□□□□□ -1.29
APOB-201ENST00000233242 SLC25A28Q96A46 364 aa6.96□□□□□ -1.29
APOB-201ENST00000233242 hCG_38984A0A1B0GV85 526 aa6.96□□□□□ -1.29
APOB-201ENST00000233242 SHISA7A6NL88 538 aa6.96□□□□□ -1.29
APOB-201ENST00000233242 ATXN7O15265 892 aaPredicted RBP6.96□□□□□ -1.29
APOB-201ENST00000233242 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.96□□□□□ -1.29
APOB-201ENST00000233242 DYNLRB2Q8TF09 96 aa6.96□□□□□ -1.29
APOB-201ENST00000233242 RBBP6Q7Z6E9 1792 aaKnown RBP6.96□□□□□ -1.29
APOB-201ENST00000233242 Q6ZS52 159 aa6.96□□□□□ -1.29
APOB-201ENST00000233242 C11orf68Q9H3H3 251 aaKnown RBP6.96□□□□□ -1.29
APOB-201ENST00000233242 HOXA3O43365 443 aaPredicted RBP6.96□□□□□ -1.3
APOB-201ENST00000233242 GPX1P07203 203 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 PLNP26678 52 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 GFI1BQ5VTD9 330 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 IGHV4-34P06331 123 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 COL9A1P20849 921 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 EGR4Q05215 589 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 A8MWP6 167 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 TDGF1P3P51864 188 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 CCL13Q99616 98 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 LOXL3P58215 753 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 CASP8AP2Q9UKL3 1982 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 THY1P04216 161 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 A0A0G2JLM5 398 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 EGR1P18146 543 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 GFRA1P56159 465 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 KLK15Q9H2R5 256 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 HILPDAQ9Y5L2 63 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 TRAV8-4A0A0B4J246 113 aa6.96□□□□□ -1.3
APOB-201ENST00000233242 PDCD11Q14690 1871 aaKnown RBP6.96□□□□□ -1.3
APOB-201ENST00000233242 IGHV5-10-1A0A0J9YXX1 117 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 MYF5P13349 255 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 ATP5G3P48201 142 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 FER1L6-AS1Q8NA97 138 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 OR5AN1Q8NGI8 311 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 TTTY12Q9BZ98 90 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 ASCL2Q99929 193 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 ASIPP42127 132 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 SCARF2Q96GP6 870 aaPredicted RBP6.95□□□□□ -1.3
APOB-201ENST00000233242 MRAP2Q96G30 205 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 FSCN3Q9NQT6 498 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 TMEM249Q2WGJ8 235 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 VKORC1L1Q8N0U8 176 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 DOCK4Q8N1I0 1966 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 PLA2G2FQ9BZM2 168 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 IGHV3-21A0A0B4J1V1 117 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 PAX1P15863 534 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 NUP37Q8NFH4 326 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 CYTL1Q9NRR1 136 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 APELAP0DMC3 54 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 USF3Q68DE3 2245 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 NDUFS6O75380 124 aaKnown RBP6.95□□□□□ -1.3
APOB-201ENST00000233242 CXCL1P09341 107 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 PATJQ8NI35 1801 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 DDB2Q92466 427 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 ZGRF1Q86YA3 2104 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 MNX1P50219 401 aaPredicted RBP6.95□□□□□ -1.3
APOB-201ENST00000233242 SUMO2P61956 95 aaKnown RBP6.95□□□□□ -1.3
APOB-201ENST00000233242 SRSF1Q07955 248 aaKnown RBP eCLIP6.95□□□□□ -1.3
APOB-201ENST00000233242 FAM106AQ4KMX7 169 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 C1QTNF5Q9BXJ0 243 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 WDR82Q6UXN9 313 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 ORMDL2Q53FV1 153 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 TPRX1Q8N7U7 411 aa6.95□□□□□ -1.3
APOB-201ENST00000233242 DLX4Q92988 240 aaPredicted RBP6.95□□□□□ -1.3
APOB-201ENST00000233242 A6NNC1 897 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 ITGB1BP1O14713 200 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 IGKV3-11P04433 115 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 C18orf15Q96N68 181 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 WFDC1Q9HC57 220 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 ARID2Q68CP9 1835 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 AHRRA9YTQ3 701 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 GREB1Q4ZG55 1949 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 PRR33A8MZF0 331 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 NPPCP23582 126 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 CACNG7P62955 275 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 MED13LQ71F56 2210 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 GZMBP10144 247 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 LYL1P12980 280 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 HTN1P15515 57 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 IGFBP2P18065 325 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 TFPI2P48307 235 aa6.94□□□□□ -1.3
APOB-201ENST00000233242 TPTE2P1Q5T6R2 138 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms