RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.75□□□□□ -0.69
MSH2-201ENST00000233146 SRSF6Q13247 344 aaKnown RBP10.75□□□□□ -0.69
MSH2-201ENST00000233146 SPTSSAQ969W0 71 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 IGF2BP2-AS1Q96M15 143 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 HINT2Q9BX68 163 aa10.75□□□□□ -0.69
MSH2-201ENST00000233146 DNAH14Q0VDD8 3507 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 FOXH1O75593 365 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 FASLGP48023 281 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 INSL3P51460 131 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 MIC13Q5XKP0 118 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 MOB1BQ7L9L4 216 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 ZNF611Q8N823 705 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 B4GALT7Q9UBV7 327 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 C15orf62A8K5M9 175 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 B5MCH6 92 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 SMAD7O15105 426 aaKnown RBP10.74□□□□□ -0.69
MSH2-201ENST00000233146 CCL16O15467 120 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 EFNA2O43921 213 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 VEGFBP49765 207 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 SFTPA2Q8IWL1 248 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 NANOS1Q8WY41 292 aaKnown RBP10.74□□□□□ -0.69
MSH2-201ENST00000233146 TMEM54Q969K7 222 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 HRASLS2Q9NWW9 162 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 IDI2-AS1Q9NZ38 188 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 LOXL2Q9Y4K0 774 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 INSIG2Q9Y5U4 225 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 WISP2O76076 250 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 CNIH1O95406 144 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 ARPC1AQ92747 370 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 MGST2Q99735 147 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 MPC1Q9Y5U8 109 aa10.74□□□□□ -0.69
MSH2-201ENST00000233146 ARHGEF17Q96PE2 2063 aaPredicted RBP10.73□□□□□ -0.69
MSH2-201ENST00000233146 NCKAP5O14513 1909 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 A0A1B0GXF2 115 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 SHISA8B8ZZ34 492 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 PDLIM3Q53GG5 364 aaPredicted RBP10.73□□□□□ -0.69
MSH2-201ENST00000233146 TREML4Q6UXN2 200 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 DDB2Q92466 427 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 ADTRPQ96IZ2 230 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 C20orf78Q9BR46 151 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 NDFIP1Q9BT67 221 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 RNF186Q9NXI6 227 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 OR1A1Q9P1Q5 309 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 DIDO1Q9BTC0 2240 aaKnown RBP10.73□□□□□ -0.69
MSH2-201ENST00000233146 C19orf67A6NJJ6 358 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 ZNF716A6NP11 495 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 HSPB6O14558 160 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 SYNGR1O43759 233 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 Q6ZR03 302 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 SMIM20Q8N5G0 67 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 HS3ST6Q96QI5 342 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 COL25A1Q9BXS0 654 aaPredicted RBP10.73□□□□□ -0.69
MSH2-201ENST00000233146 TRBV6-6A0A0A6YYG2 114 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 NPIPB11E5RHQ5 1161 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 MT-ATP8P03928 68 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 CAMPP49913 170 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.73□□□□□ -0.691e-6■■■■■ 33.4
MSH2-201ENST00000233146 ATP5L2Q7Z4Y8 100 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 NABP1Q96AH0 204 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 SDK1Q7Z5N4 2213 aa10.73□□□□□ -0.69
MSH2-201ENST00000233146 BCL3P20749 454 aa10.72□□□□□ -0.69
MSH2-201ENST00000233146 COL8A2P25067 703 aa10.72□□□□□ -0.69
MSH2-201ENST00000233146 G6PCP35575 357 aa10.72□□□□□ -0.69
MSH2-201ENST00000233146 EFNB3Q15768 340 aa10.72□□□□□ -0.69
MSH2-201ENST00000233146 MMABQ96EY8 250 aaPredicted RBP10.72□□□□□ -0.69
MSH2-201ENST00000233146 hADV38S2A0JD32 116 aa10.72□□□□□ -0.69
MSH2-201ENST00000233146 CRYGSP22914 178 aa10.72□□□□□ -0.69
MSH2-201ENST00000233146 FOXA3P55318 350 aaPredicted RBP10.72□□□□□ -0.69
MSH2-201ENST00000233146 RTL8BQ17RB0 113 aa10.72□□□□□ -0.69
MSH2-201ENST00000233146 FAM214BQ7L5A3 538 aa10.72□□□□□ -0.69
MSH2-201ENST00000233146 ANAPC13Q9BS18 74 aa10.72□□□□□ -0.69
MSH2-201ENST00000233146 ZNF355PQ9NSJ1 428 aa10.72□□□□□ -0.69
MSH2-201ENST00000233146 NKX2-8O15522 239 aa10.71□□□□□ -0.69
MSH2-201ENST00000233146 ZIC3O60481 467 aa10.71□□□□□ -0.69
MSH2-201ENST00000233146 CER1O95813 267 aa10.71□□□□□ -0.69
MSH2-201ENST00000233146 KLRD1Q13241 179 aa10.71□□□□□ -0.69
MSH2-201ENST00000233146 FAM231DQ6ZW35 169 aa10.71□□□□□ -0.69
MSH2-201ENST00000233146 PHLDA1Q8WV24 401 aaPredicted RBP10.71□□□□□ -0.69
MSH2-201ENST00000233146 OXGR1Q96P68 337 aa10.71□□□□□ -0.69
MSH2-201ENST00000233146 UFC1Q9Y3C8 167 aa10.71□□□□□ -0.69
MSH2-201ENST00000233146 CHD7Q9P2D1 2997 aa10.71□□□□□ -0.69
MSH2-201ENST00000233146 LCNL1Q6ZST4 164 aa10.71□□□□□ -0.69
MSH2-201ENST00000233146 OR1L3Q8NH93 324 aa10.71□□□□□ -0.69
MSH2-201ENST00000233146 RAX2Q96IS3 184 aa10.71□□□□□ -0.69
MSH2-201ENST00000233146 TM2D2Q9BX73 214 aa10.71□□□□□ -0.69
MSH2-201ENST00000233146 ZNF407Q9C0G0 2248 aa10.71□□□□□ -0.7
MSH2-201ENST00000233146 VDAC2P45880 294 aaPredicted RBP10.71□□□□□ -0.7
MSH2-201ENST00000233146 TAS2R45P59539 299 aa10.71□□□□□ -0.7
MSH2-201ENST00000233146 FGF12P61328 243 aa10.71□□□□□ -0.7
MSH2-201ENST00000233146 ASPHD1Q5U4P2 390 aa10.71□□□□□ -0.7
MSH2-201ENST00000233146 IGF2-ASQ6U949 168 aa10.71□□□□□ -0.7
MSH2-201ENST00000233146 ANKRD37Q7Z713 158 aa10.71□□□□□ -0.7
MSH2-201ENST00000233146 OR10X1Q8NGY0 326 aa10.71□□□□□ -0.7
MSH2-201ENST00000233146 ZNF502Q8TBZ5 544 aa10.71□□□□□ -0.7
MSH2-201ENST00000233146 HARBI1Q96MB7 349 aa10.71□□□□□ -0.7
MSH2-201ENST00000233146 DHHO43323 396 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 NCR2O95944 276 aa10.7□□□□□ -0.7
MSH2-201ENST00000233146 KIR2DL2P43627 348 aaPredicted RBP10.7□□□□□ -0.7
MSH2-201ENST00000233146 RPS21P63220 83 aaKnown RBP10.7□□□□□ -0.7
MSH2-201ENST00000233146 DRAM1Q8N682 238 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms