RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 TSPAN9O75954 239 aa15.45■□□□□ 0.06
YBX3-201ENST00000228251 ARL14EPLP0DKL9 152 aa15.45■□□□□ 0.06
YBX3-201ENST00000228251 IL3RAP26951 378 aa15.45■□□□□ 0.06
YBX3-201ENST00000228251 CD69Q07108 199 aa15.45■□□□□ 0.06
YBX3-201ENST00000228251 GAMTQ14353 236 aa15.45■□□□□ 0.06
YBX3-201ENST00000228251 TMEM241Q24JQ0 296 aa15.45■□□□□ 0.06
YBX3-201ENST00000228251 BEND2Q8NDZ0 799 aa15.45■□□□□ 0.06
YBX3-201ENST00000228251 CBLN4Q9NTU7 201 aa15.45■□□□□ 0.06
YBX3-201ENST00000228251 HIVEP3Q5T1R4 2406 aa15.45■□□□□ 0.06
YBX3-201ENST00000228251 TPRP12270 2363 aaKnown RBP15.44■□□□□ 0.06
YBX3-201ENST00000228251 C11orf94C9JXX5 98 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 CRYGBP07316 175 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 RPL23P62829 140 aaKnown RBP15.44■□□□□ 0.06
YBX3-201ENST00000228251 WT1-ASQ06250 92 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 RAB31Q13636 194 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 RPUSD4Q96CM3 377 aaKnown RBP15.44■□□□□ 0.06
YBX3-201ENST00000228251 FAM122AQ96E09 287 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 CTDSP1Q9GZU7 261 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 SEPSECSQ9HD40 501 aaKnown RBP15.44■□□□□ 0.06
YBX3-201ENST00000228251 CXorf1O96002 111 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 IGHV2-5P01817 119 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 LGALS7P47929 136 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 DLX1P56177 255 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 SPATA31B1PQ5VZV4 182 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 CACNG8Q8WXS5 425 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 SSX3Q99909 188 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 TPSG1Q9NRR2 321 aa15.44■□□□□ 0.06
YBX3-201ENST00000228251 A0A1W2PN81 502 aa15.43■□□□□ 0.06
YBX3-201ENST00000228251 CLDN34H7C241 214 aa15.43■□□□□ 0.06
YBX3-201ENST00000228251 CHRNA7P36544 502 aa15.43■□□□□ 0.06
YBX3-201ENST00000228251 GPX4P36969 197 aaPredicted RBP15.43■□□□□ 0.06
YBX3-201ENST00000228251 ATP5G3P48201 142 aa15.43■□□□□ 0.06
YBX3-201ENST00000228251 C10orf55Q5SWW7 151 aa15.43■□□□□ 0.06
YBX3-201ENST00000228251 PVRIGQ6DKI7 326 aa15.43■□□□□ 0.06
YBX3-201ENST00000228251 IQCF2Q8IXL9 164 aa15.43■□□□□ 0.06
YBX3-201ENST00000228251 LINC00518Q8N0U6 118 aa15.43■□□□□ 0.06
YBX3-201ENST00000228251 TXNDC17Q9BRA2 123 aa15.43■□□□□ 0.06
YBX3-201ENST00000228251 CLEC7AQ9BXN2 247 aa15.43■□□□□ 0.06
YBX3-201ENST00000228251 RAB1BQ9H0U4 201 aa15.43■□□□□ 0.06
YBX3-201ENST00000228251 MIOXQ9UGB7 285 aa15.43■□□□□ 0.06
YBX3-201ENST00000228251 COL6A6A6NMZ7 2263 aa15.42■□□□□ 0.06
YBX3-201ENST00000228251 PPIAL4CA0A0B4J2A2 164 aa15.42■□□□□ 0.06
YBX3-201ENST00000228251 LY6LH3BQJ8 138 aa15.42■□□□□ 0.06
YBX3-201ENST00000228251 PDE6DO43924 150 aa15.42■□□□□ 0.06
YBX3-201ENST00000228251 SOD3P08294 240 aa15.42■□□□□ 0.06
YBX3-201ENST00000228251 PPIAL4GP0DN37 164 aa15.42■□□□□ 0.06
YBX3-201ENST00000228251 RHOBP62745 196 aa15.42■□□□□ 0.06
YBX3-201ENST00000228251 GNB1P62873 340 aa15.42■□□□□ 0.06
YBX3-201ENST00000228251 LY6DQ14210 128 aa15.42■□□□□ 0.06
YBX3-201ENST00000228251 MLANAQ16655 118 aa15.42■□□□□ 0.06
YBX3-201ENST00000228251 PNKDQ8N490 385 aa15.42■□□□□ 0.06
YBX3-201ENST00000228251 PLXNB1O43157 2135 aa15.42■□□□□ 0.06
YBX3-201ENST00000228251 TGIF2-C20orf24A0A0A6YYL0 155 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 BUB1B-PAK6H3BSN5 160 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 SLC25A17O43808 307 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 GCHFRP30047 84 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 PRRX1P54821 245 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 ERHP84090 104 aaKnown RBP15.41■□□□□ 0.06
YBX3-201ENST00000228251 ZNF674Q2M3X9 581 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 VMA21Q3ZAQ7 101 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 DTX2Q86UW9 622 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 TEX45Q8NA69 505 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 OR8B3Q8NGG8 313 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 OR4P4Q8NGL7 312 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 SLC35E1Q96K37 410 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 OR8B2Q96RD0 313 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 C22orf46C9J442 243 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 UBE2CO00762 179 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 LY6HO94772 140 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 VENTXO95231 258 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 SFTPCP11686 197 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 SLC16A13Q7RTY0 426 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 OR51G1Q8NGK1 321 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 URGCP-MRPS24S4R325 110 aa15.41■□□□□ 0.06
YBX3-201ENST00000228251 CACNA1AO00555 2505 aa15.4■□□□□ 0.06
YBX3-201ENST00000228251 TRBV24-1A0A075B6N3 115 aa15.4■□□□□ 0.06
YBX3-201ENST00000228251 IGHV1-3A0A0C4DH29 117 aa15.4■□□□□ 0.06
YBX3-201ENST00000228251 A0A1W2PPI3 338 aa15.4■□□□□ 0.06
YBX3-201ENST00000228251 PSMB11A5LHX3 300 aa15.4■□□□□ 0.06
YBX3-201ENST00000228251 F6UZH7 168 aa15.4■□□□□ 0.06
YBX3-201ENST00000228251 UBE2G2P60604 165 aa15.4■□□□□ 0.06
YBX3-201ENST00000228251 SNRPEP62304 92 aaKnown RBP15.4■□□□□ 0.06
YBX3-201ENST00000228251 ADIRFQ15847 76 aa15.4■□□□□ 0.06
YBX3-201ENST00000228251 RNASEH2CQ8TDP1 164 aaKnown RBP15.4■□□□□ 0.06
YBX3-201ENST00000228251 DOK5Q9P104 306 aa15.4■□□□□ 0.06
YBX3-201ENST00000228251 PRELID1Q9Y255 219 aa15.4■□□□□ 0.06
YBX3-201ENST00000228251 IGHV3-72A0A0B4J1Y9 119 aa15.39■□□□□ 0.05
YBX3-201ENST00000228251 A0A1W2PPR1 153 aa15.39■□□□□ 0.05
YBX3-201ENST00000228251 OR10J1P30954 320 aa15.39■□□□□ 0.05
YBX3-201ENST00000228251 NEU4Q8WWR8 484 aaPredicted RBP15.39■□□□□ 0.05
YBX3-201ENST00000228251 FNDC4Q9H6D8 234 aaPredicted RBP15.39■□□□□ 0.05
YBX3-201ENST00000228251 METTL1Q9UBP6 276 aaKnown RBP15.39■□□□□ 0.05
YBX3-201ENST00000228251 YTHDF2Q9Y5A9 579 aaKnown RBP15.39■□□□□ 0.05
YBX3-201ENST00000228251 IGLC7A0M8Q6 106 aa15.39■□□□□ 0.05
YBX3-201ENST00000228251 PFN1P07737 140 aaKnown RBP15.39■□□□□ 0.05
YBX3-201ENST00000228251 OR5G3P0C626 314 aa15.39■□□□□ 0.05
YBX3-201ENST00000228251 PRB3Q04118 309 aaPredicted RBP15.39■□□□□ 0.05
YBX3-201ENST00000228251 PRSS8Q16651 343 aa15.39■□□□□ 0.05
YBX3-201ENST00000228251 LDLRAD2Q5SZI1 272 aa15.39■□□□□ 0.05
YBX3-201ENST00000228251 UNQ6494/PRO21346Q6UXR6 183 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms