RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 TTC9CQ8N5M4 171 aa12.82□□□□□ -0.36
LIM2-201ENST00000221973 OR5AU1Q8NGC0 362 aa12.82□□□□□ -0.36
LIM2-201ENST00000221973 OR11H7Q8NGC8 314 aa12.82□□□□□ -0.36
LIM2-201ENST00000221973 FAM110DQ8TAY7 271 aaPredicted RBP12.82□□□□□ -0.36
LIM2-201ENST00000221973 PRH1P02810 166 aa12.81□□□□□ -0.36
LIM2-201ENST00000221973 IAPPP10997 89 aa12.81□□□□□ -0.36
LIM2-201ENST00000221973 POLR2GP62487 172 aaKnown RBP eCLIP12.81□□□□□ -0.36
LIM2-201ENST00000221973 ERHP84090 104 aaKnown RBP12.81□□□□□ -0.36
LIM2-201ENST00000221973 ID3Q02535 119 aa12.81□□□□□ -0.36
LIM2-201ENST00000221973 MRPL41Q8IXM3 137 aaKnown RBP12.81□□□□□ -0.36
LIM2-201ENST00000221973 DTD1Q8TEA8 209 aa12.81□□□□□ -0.36
LIM2-201ENST00000221973 WDR89Q96FK6 387 aaPredicted RBP12.81□□□□□ -0.36
LIM2-201ENST00000221973 HEYLQ9NQ87 328 aaPredicted RBP12.81□□□□□ -0.36
LIM2-201ENST00000221973 ZNF355PQ9NSJ1 428 aa12.81□□□□□ -0.36
LIM2-201ENST00000221973 PLXNB1O43157 2135 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 hCG_2014768A0A024R1R8 64 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 NPIPB5A8MRT5 1133 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 WRBO00258 174 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 FBXO24O75426 580 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 MED6O75586 246 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 IGHG4P01861 327 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 MBPP02686 304 aaPredicted RBP12.8□□□□□ -0.36
LIM2-201ENST00000221973 CRYGCP07315 174 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 PF4V1P10720 104 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 CTRB1P17538 263 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 CTRB2Q6GPI1 263 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 TEX38Q6PEX7 206 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 LCNL1Q6ZST4 164 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 C1QL4Q86Z23 238 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 OR2C3Q8N628 320 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 C11orf44Q8N8P7 122 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 WIPF2Q8TF74 440 aaPredicted RBP12.8□□□□□ -0.36
LIM2-201ENST00000221973 MS4A10Q96PG2 267 aa12.8□□□□□ -0.36
LIM2-201ENST00000221973 TNCP24821 2201 aa12.79□□□□□ -0.36
LIM2-201ENST00000221973 SYNGR2O43760 224 aa12.79□□□□□ -0.36
LIM2-201ENST00000221973 IGLV1-40P01703 118 aa12.79□□□□□ -0.36
LIM2-201ENST00000221973 DEFA4P12838 97 aa12.79□□□□□ -0.36
LIM2-201ENST00000221973 HIST2H2BDQ6DRA6 164 aa12.79□□□□□ -0.36
LIM2-201ENST00000221973 OR4X2Q8NGF9 303 aa12.79□□□□□ -0.36
LIM2-201ENST00000221973 NMES1Q9C002 83 aa12.79□□□□□ -0.36
LIM2-201ENST00000221973 KLK15Q9H2R5 256 aa12.79□□□□□ -0.36
LIM2-201ENST00000221973 HIPK2Q9H2X6 1198 aa12.79□□□□□ -0.36
LIM2-201ENST00000221973 LSM5Q9Y4Y9 91 aaKnown RBP12.79□□□□□ -0.36
LIM2-201ENST00000221973 INS-IGF2F8WCM5 200 aa12.78□□□□□ -0.36
LIM2-201ENST00000221973 SSSCA1O60232 199 aa12.78□□□□□ -0.36
LIM2-201ENST00000221973 CD28P10747 220 aa12.78□□□□□ -0.36
LIM2-201ENST00000221973 SNCAP37840 140 aa12.78□□□□□ -0.36
LIM2-201ENST00000221973 S100A10P60903 97 aa12.78□□□□□ -0.36
LIM2-201ENST00000221973 CYCSP99999 105 aaKnown RBP12.78□□□□□ -0.36
LIM2-201ENST00000221973 IL15RAQ13261 267 aa12.78□□□□□ -0.36
LIM2-201ENST00000221973 FOXE3Q13461 319 aa12.78□□□□□ -0.36
LIM2-201ENST00000221973 RAB32Q13637 225 aa12.78□□□□□ -0.36
LIM2-201ENST00000221973 TMEM65Q6PI78 240 aa12.78□□□□□ -0.36
LIM2-201ENST00000221973 COMMD1Q8N668 190 aa12.78□□□□□ -0.36
LIM2-201ENST00000221973 P2RX4Q99571 388 aa12.78□□□□□ -0.36
LIM2-201ENST00000221973 F11RQ9Y624 299 aaKnown RBP12.78□□□□□ -0.36
LIM2-201ENST00000221973 TET2Q6N021 2002 aaPredicted RBP12.78□□□□□ -0.36
LIM2-201ENST00000221973 DNAH3Q8TD57 4116 aa12.77□□□□□ -0.36
LIM2-201ENST00000221973 K7EPK0 472 aa12.77□□□□□ -0.37
LIM2-201ENST00000221973 TRGV3P03979 118 aa12.77□□□□□ -0.37
LIM2-201ENST00000221973 ELANEP08246 267 aa12.77□□□□□ -0.37
LIM2-201ENST00000221973 PSMB8P28062 276 aa12.77□□□□□ -0.37
LIM2-201ENST00000221973 RAB9AP51151 201 aa12.77□□□□□ -0.37
LIM2-201ENST00000221973 TPPP2P59282 170 aa12.77□□□□□ -0.37
LIM2-201ENST00000221973 DEFA5Q01523 94 aa12.77□□□□□ -0.37
LIM2-201ENST00000221973 LRRC37A5PQ49AS3 106 aa12.77□□□□□ -0.37
LIM2-201ENST00000221973 TCTEX1D4Q5JR98 221 aa12.77□□□□□ -0.37
LIM2-201ENST00000221973 SLC25A24Q6NUK1 477 aa12.77□□□□□ -0.37
LIM2-201ENST00000221973 FANCD2OSQ96PS1 177 aa12.77□□□□□ -0.37
LIM2-201ENST00000221973 ZNF436Q9C0F3 470 aaPredicted RBP12.77□□□□□ -0.37
LIM2-201ENST00000221973 RCL1Q9Y2P8 373 aaKnown RBP12.77□□□□□ -0.37
LIM2-201ENST00000221973 DMRT1Q9Y5R6 373 aa12.77□□□□□ -0.37
LIM2-201ENST00000221973 A0A1B0GVG6 124 aa12.76□□□□□ -0.37
LIM2-201ENST00000221973 H3BUA1 57 aa12.76□□□□□ -0.37
LIM2-201ENST00000221973 OR2J3O76001 311 aa12.76□□□□□ -0.37
LIM2-201ENST00000221973 IFNA10P01566 189 aa12.76□□□□□ -0.37
LIM2-201ENST00000221973 RPLP1P05386 114 aaKnown RBP12.76□□□□□ -0.37
LIM2-201ENST00000221973 RNASE2P10153 161 aaKnown RBP12.76□□□□□ -0.37
LIM2-201ENST00000221973 HTR2BP41595 481 aa12.76□□□□□ -0.37
LIM2-201ENST00000221973 MFAP2P55001 183 aa12.76□□□□□ -0.37
LIM2-201ENST00000221973 KHDC1LQ5JSQ8 128 aa12.76□□□□□ -0.37
LIM2-201ENST00000221973 ZNF114Q8NC26 417 aa12.76□□□□□ -0.37
LIM2-201ENST00000221973 SLC24A4Q8NFF2 622 aa12.76□□□□□ -0.37
LIM2-201ENST00000221973 PPP1R1CQ8WVI7 109 aa12.76□□□□□ -0.37
LIM2-201ENST00000221973 CIB3Q96Q77 187 aaPredicted RBP12.76□□□□□ -0.37
LIM2-201ENST00000221973 IGLV11-55A0A075B6I3 123 aa12.75□□□□□ -0.37
LIM2-201ENST00000221973 TCRBV4S1A1TA0A5B7 111 aa12.75□□□□□ -0.37
LIM2-201ENST00000221973 H3BP45 60 aa12.75□□□□□ -0.37
LIM2-201ENST00000221973 SUB1P53999 127 aaKnown RBP eCLIP12.75□□□□□ -0.37
LIM2-201ENST00000221973 RHOGP84095 191 aa12.75□□□□□ -0.37
LIM2-201ENST00000221973 OR1P1Q8NH06 330 aa12.75□□□□□ -0.37
LIM2-201ENST00000221973 CHAC2Q8WUX2 184 aa12.75□□□□□ -0.37
LIM2-201ENST00000221973 MISP3Q96FF7 219 aa12.75□□□□□ -0.37
LIM2-201ENST00000221973 RAB40CQ96S21 281 aa12.75□□□□□ -0.37
LIM2-201ENST00000221973 SLA2Q9H6Q3 261 aa12.75□□□□□ -0.37
LIM2-201ENST00000221973 PSENENQ9NZ42 101 aa12.75□□□□□ -0.37
LIM2-201ENST00000221973 PAIP2BQ9ULR5 123 aaKnown RBP12.75□□□□□ -0.37
LIM2-201ENST00000221973 TRBV9A0A0B4J1U6 114 aa12.74□□□□□ -0.37
LIM2-201ENST00000221973 L7N2F9 121 aa12.74□□□□□ -0.37
LIM2-201ENST00000221973 CYB5BO43169 146 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms