RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 LMO1P25800 156 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 CCKARP32238 428 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 NUBP1P53384 320 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 HLA-DRB5Q30154 266 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 MBNL2Q5VZF2 373 aaKnown RBP8.06□□□□□ -1.12
CSTF1-201ENST00000217109 OR1L4Q8NGR5 311 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 HSPB9Q9BQS6 159 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 MRPL18Q9H0U6 180 aaKnown RBP8.06□□□□□ -1.12
CSTF1-201ENST00000217109 TRAV34A0A0B4J273 112 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 C15orf61A6NNL5 157 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 TMEM11P17152 192 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 MFAP2P55001 183 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 EFNB3Q15768 340 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 MLANAQ16655 118 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 MMD2Q8IY49 270 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 OR9G1Q8NH87 305 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 TIMD4Q96H15 378 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 ASCL3Q9NQ33 180 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 SAA1P0DJI8 122 aaPredicted RBP8.06□□□□□ -1.12
CSTF1-201ENST00000217109 PAX5Q02548 391 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 C10orf55Q5SWW7 151 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 C11orf53Q8IXP5 236 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 OR2T6Q8NHC8 308 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 TXNDC17Q9BRA2 123 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 DNAJC4Q9NNZ3 241 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 ATG2AQ2TAZ0 1938 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 CHEK1O14757 476 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 GFRA3O60609 400 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 FOXH1O75593 365 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 C8orf88P0DMB2 117 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 USF1P22415 310 aaPredicted RBP8.06□□□□□ -1.12
CSTF1-201ENST00000217109 PRRX1P54821 245 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 IBA57Q5T440 356 aaKnown RBP8.06□□□□□ -1.12
CSTF1-201ENST00000217109 RNASEKQ6P5S7 137 aaKnown RBP8.06□□□□□ -1.12
CSTF1-201ENST00000217109 OR4C13Q8NGP0 309 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 MGST2Q99735 147 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 CPAMD8Q8IZJ3 1885 aa8.06□□□□□ -1.12
CSTF1-201ENST00000217109 MOSP00540 346 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 IGHV2-5P01817 119 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 RAB4AP20338 218 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 ZNF134P52741 427 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 RELBQ01201 579 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 LINC01551Q86U37 167 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 ZMAT5Q9UDW3 170 aaKnown RBP8.05□□□□□ -1.12
CSTF1-201ENST00000217109 TNFSF13O75888 250 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 IGKV1-16P04430 117 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 LHFPL4Q7Z7J7 247 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 OR2D3Q8NGH3 330 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 PRO3102Q9H379 93 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 TMEM242Q9NWH2 141 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 NOTCH3Q9UM47 2321 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 IGLV2-14P01704 120 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 HIST1H1BP16401 226 aaKnown RBP8.05□□□□□ -1.12
CSTF1-201ENST00000217109 SEBOXQ9HB31 216 aaPredicted RBP8.05□□□□□ -1.12
CSTF1-201ENST00000217109 HILPDAQ9Y5L2 63 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 PLXNB1O43157 2135 aa8.05□□□□□ -1.12
CSTF1-201ENST00000217109 C17orf100A8MU93 164 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 LYNX1G3V0Z9 82 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 RBFOX2O43251 390 aaKnown RBP eCLIP8.04□□□□□ -1.12
CSTF1-201ENST00000217109 LYNX1P0DP58 116 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 DAZAP2Q15038 168 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-201ENST00000217109 ETFRF1Q6IPR1 90 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 ODF3L1Q8IXM7 274 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 RNASE7Q9H1E1 156 aaKnown RBP8.04□□□□□ -1.12
CSTF1-201ENST00000217109 IFI27L2Q9H2X8 130 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 PGPA6NDG6 321 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 DLL1O00548 723 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 RPL27AP46776 148 aaKnown RBP8.04□□□□□ -1.12
CSTF1-201ENST00000217109 MMDQ15546 238 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 LINC01560Q8TB33 94 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 TNFRSF19Q9NS68 423 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 WASHC3Q9Y3C0 194 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 AMMECR1Q9Y4X0 333 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-201ENST00000217109 PRB4P10163 310 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-201ENST00000217109 SPRNQ5BIV9 151 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 TMEM106BQ9NUM4 274 aa8.04□□□□□ -1.12
CSTF1-201ENST00000217109 CHD3Q12873 2000 aaKnown RBP8.04□□□□□ -1.12
CSTF1-201ENST00000217109 HSBP1L1C9JCN9 74 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 AMBPP02760 352 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 STAG3L2P0CL84 134 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 STAG3L3P0CL85 134 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 CD33P20138 364 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 ZNF137PP52743 207 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 WDR73Q6P4I2 378 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 FAM57AQ8TBR7 257 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 A0A1B0GV90 55 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 UPK2O00526 184 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 TIMP3P35625 211 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 LCN2P80188 198 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 C11orf1Q9H5F2 150 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 ZNF430Q9H8G1 570 aaPredicted RBP8.03□□□□□ -1.12
CSTF1-201ENST00000217109 CSN3P07498 182 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 TMEM144Q7Z5S9 345 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 TMEM170AQ8WVE7 144 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 AGMATQ9BSE5 352 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 CBLN4Q9NTU7 201 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 NAGKQ9UJ70 344 aa8.03□□□□□ -1.12
CSTF1-201ENST00000217109 RPUSD1Q9UJJ7 312 aaKnown RBP8.03□□□□□ -1.12
CSTF1-201ENST00000217109 KLF2Q9Y5W3 355 aaPredicted RBP8.03□□□□□ -1.12
CSTF1-201ENST00000217109 TRAV5A0A0B4J249 113 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms