RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 TPTE2P1Q5T6R2 138 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 NEUROG1Q92886 237 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 GPR82Q96P67 336 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 VAMP8Q9BV40 100 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 IGKV1D-13A0A0B4J2D9 117 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 IGKV1-13P0DP09 117 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 COL8A2P25067 703 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 Q5PR19 223 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 GOLT1AQ6ZVE7 132 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 CD177Q8N6Q3 437 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 ZNF525Q8N782 197 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 RNF5Q99942 180 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 NPCDR1Q9BY65 106 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 NUP210Q8TEM1 1887 aaPredicted RBP8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 A0A087WV48 116 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 NPFFO15130 113 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 SELLP14151 372 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 SRD5A1P18405 259 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 GCHFRP30047 84 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 RELBQ01201 579 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 SMUG1Q53HV7 270 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 ZNF324BQ6AW86 544 aaPredicted RBP8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 TRAV41A0A0B4J266 112 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 TOMM20LQ6UXN7 152 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 RPRMLQ8N4K4 120 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 SGMS2Q8NHU3 365 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 TRAF4Q9BUZ4 470 aaPredicted RBP8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 PROK2Q9HC23 129 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 TBL2Q9Y4P3 447 aaKnown RBP8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 FAM90A9PA6NNJ1 464 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 FOXI3A8MTJ6 420 aaPredicted RBP8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 CD8AP01732 235 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 IGFBP2P18065 325 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 IQCJQ1A5X6 159 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 TMEM42Q69YG0 159 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 PVRIGQ6DKI7 326 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 GAFA1Q96PS6 74 aa8.59□□□□□ -1.03
NIPAL3-201ENST00000003912 PSMB11A5LHX3 300 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 NBEAP1P0C6P0 100 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 TRGC1P0CF51 173 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 CD99P14209 185 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 CRYBB3P26998 211 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 HGFACQ04756 655 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 ICAM4Q14773 271 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 HIST1H2BAQ96A08 127 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 F12P00748 615 aaPredicted RBP8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 EGR1P18146 543 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 OTX1P32242 354 aaPredicted RBP8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 CHAC2Q8WUX2 184 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 DMRTA2Q96SC8 542 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 IGKV1-27A0A075B6S5 117 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 TNFSF13O75888 250 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 NSUN5P1Q3KNT7 163 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 ZNF600Q6ZNG1 722 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 MAP1LC3CQ9BXW4 147 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 BET1LQ9NYM9 111 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 TMEM191AQ9H0A3 160 aa8.58□□□□□ -1.04
NIPAL3-201ENST00000003912 RNF223E7ERA6 249 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 H3BUX3 64 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 PSPNO60542 156 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 KLRD1Q13241 179 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 ZNF660Q6AZW8 331 aaPredicted RBP8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 HSPB8Q9UJY1 196 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 IGHV1-3A0A0C4DH29 117 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 HLA-DRB1P01911 266 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 AREGP15514 252 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 PMS2P11Q13670 270 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 PRO3102Q9H379 93 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 RPRMQ9NS64 109 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 ZNF257Q9Y2Q1 563 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 ANAPC1Q9H1A4 1944 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 GCGP01275 180 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 MT-ND6P03923 174 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 PRCDQ00LT1 54 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 ELOBQ15370 118 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 TMEM144Q7Z5S9 345 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 A0A0A6YYD4 124 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 LINC00862A6NCI5 91 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 DANCRP0C864 163 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 CKS2P33552 79 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 BRD3OSQ6XYD6 125 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 OR52E5Q8NH55 327 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 SH3BGRL3Q9H299 93 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 MLNRO43193 412 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 MSMBP08118 114 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 CCKARP32238 428 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 NR2C2APQ86WQ0 139 aa8.57□□□□□ -1.04
NIPAL3-201ENST00000003912 TRAV14DV4A0A0A6YYC5 116 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 CEACAM4O75871 244 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 C19orf54Q5BKX5 351 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 LDLRAD2Q5SZI1 272 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 LY6HO94772 140 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 C2orf68Q2NKX9 166 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 C11orf44Q8N8P7 122 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 LHFPL5Q8TAF8 219 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 ISOC2Q96AB3 205 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 CDC42EP3Q9UKI2 254 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 MYO7BQ6PIF6 2116 aa8.56□□□□□ -1.04
NIPAL3-201ENST00000003912 RAMP3O60896 148 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms