RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Trbv15A0A0A6YYE3 115 aa8.94□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Gm14325A2AW67 498 aa8.94□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr1329L7MTV4 313 aa8.94□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Mrpl23O35972 146 aaKnown RBP8.94□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 D330020A13RikQ8C799 211 aa8.94□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr490Q8VFD2 314 aa8.94□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Plrg1Q922V4 513 aaKnown RBP8.94□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Tmem42Q9CR22 157 aa8.94□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Tmem54Q9D7S1 219 aa8.94□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Serf2P84102 59 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 HaaoQ78JT3 286 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Tmem167bQ80X45 74 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 9930021J03RikH3BKP8 2027 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Dock3Q8CIQ7 2027 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Mettl4Q3U034 471 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Tmem171Q4KL18 322 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr153Q7TR48 307 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Zbtb49Q8BXX2 756 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 BivmQ8CBX9 502 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Dusp18Q8VE01 188 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr822Q8VFU1 312 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 SdhdQ9CXV1 159 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Tceal8Q9CZY2 117 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Ppp1r1aQ9ERT9 171 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 SnrpeP62305 92 aaKnown RBP8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Lrrc52Q5M8M9 314 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Oas1bQ60856 376 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr136Q8VG72 312 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr559Q8VH14 318 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 4930412O13RikQ9D5M9 106 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Fcgr4A0A0B4J1G0 249 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Rsg1A2A825 258 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Gm14288E9Q9W0 88 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Gm5218F6YH22 154 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Gm10428J3QNV7 132 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Gm10666K7N6B8 321 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 F2rl2O08675 369 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Gm20767O70517 169 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Igf2P09535 180 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Cr2P19070 1025 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Ear1P97426 155 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Adgrg5Q3V3Z3 524 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Zdhhc23Q5Y5T3 425 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Foxb2Q64733 428 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Znf511Q6P0X2 227 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Nit1Q8VDK1 323 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr1269Q8VEZ2 309 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr1265Q8VEZ3 309 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Defb7Q91V70 71 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Gar1Q9CY66 231 aaKnown RBP8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Prss37Q9DAA4 237 aa8.93□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Cacna1bO55017 2327 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Gm35060A0A140LIV7 231 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Sult2a4L7N245 285 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Rpl29P47915 160 aaKnown RBP8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Dvl1P51141 695 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Hist1h2baP70696 127 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Gm10277Q6R5C6 214 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr960Q8VET5 316 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr266Q8VFC3 316 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Uqcc1Q9CWU6 295 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Dnase2bQ9QY48 354 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 H60bB1B212 251 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Gm20422E9PUR3 255 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 C2cd4dP0CG09 341 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Sap30lQ5SQF8 182 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr1042Q7TR81 313 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr91Q7TRL3 312 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Zfp959Q91VM8 539 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 GpnmbQ99P91 574 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 TecrQ9CY27 308 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Mnx1Q9QZW9 404 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Ctxnd1A0A1B0GST9 59 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr896-ps1A0A1L1SRZ8 308 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Zfp980A2A9J5 645 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Phxr2P15972 65 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 OsmP53347 263 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Tmprss13Q5U405 543 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 IqcjQ8BPW0 110 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Fam214bQ8BR27 538 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr355Q8VFP6 310 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr1242Q8VGM6 306 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Ms4a6bQ99N09 244 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Tbx21Q9JKD8 530 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Trbv5A0A0B4J1G9 113 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr418A0A140T8J6 310 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Zfp930A0A1D5RM15 441 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 E030025P04RikA2A6V5 185 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr204E9Q8M0 305 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Saa1P05366 122 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Tctex1d2Q9CQ66 144 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Mpdu1Q9R0Q9 247 aa8.92□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Olfr1436A0PK57 315 aa8.91□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Zfp979A2A799 407 aa8.91□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Prss12O08762 761 aa8.91□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 B2mP01887 119 aa8.91□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Evi2aP20934 223 aa8.91□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 NdnP25233 325 aa8.91□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 FasP25446 327 aa8.91□□□□□ -0.98
Ccdc40-201ENSMUST00000035935 Sssca1P56873 199 aa8.91□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 86.7 ms