RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr1233Q8VGN0 305 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Lhx2Q9Z0S2 406 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Rpl23a-ps3A0A140T8M7 156 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr893K7N678 312 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 P01798 113 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Pax1P09084 446 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Rpl23aP62751 156 aaKnown RBP14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Hhipl1Q14DK5 791 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Gpank1Q61858 372 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Ear10Q923L6 156 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Vmn1r180B9EK86 305 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm4950D3YUM8 205 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm43191F6YIH5 235 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 P18528 98 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Tpsb2P21845 276 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 RorcP51450 516 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Alkal2Q80UG6 151 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Gltpd2Q8K0R6 321 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Dtwd2Q9D0U1 298 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Rarres2Q9DD06 162 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr878Q9EQA9 314 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 NgfrQ9Z0W1 417 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Heatr1G3X9B1 2143 aaKnown RBP14□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm19345G3UYD9 124 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm10665K7N6B7 321 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Mtatp6P00848 226 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Cd59bP58019 129 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Rab11aP62492 216 aaKnown RBP14□□□□□ -0.17
Shh-201ENSMUST00000002708 Zglp1Q1WG82 266 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Mbd6Q3TY92 1003 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 B230104I21RikQ3USW4 141 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr132Q7TRI8 313 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Zc3h3Q8CHP0 950 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Trib3Q8K4K2 354 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Klhdc3Q8VEM9 382 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr483Q8VG05 315 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 MsmpB1AWI6 139 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr902E9Q6Z7 309 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Vmn1r194J3JS27 296 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Vmn1r121K7N6J4 314 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Rab1AP62821 205 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Clec12bQ149M0 275 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Taar8bQ5QD06 344 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Zfp677Q6PEP4 634 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 EogtQ8BYW9 527 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr136Q8VG72 312 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr1260Q8VGN9 310 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Abhd14aQ922Q6 247 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Ccdc198Q9CPZ1 294 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Pfdn5Q9WU28 154 aa14□□□□□ -0.17
Shh-201ENSMUST00000002708 Vmn1r128L7N2B4 307 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 SellP18337 372 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Slc6a9P28571 692 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Q3UUX7 111 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Mtch1Q791T5 389 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr504Q7TRU7 318 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Bpifb3Q80ZU7 473 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Nup35Q8R4R6 325 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Gabrg1Q9R0Y8 465 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm19410A0A140LJC7 2098 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 1700031F05RikB1AX30 191 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm4787B2RUD9 748 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 H2-M10.1O19443 331 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Cdx1P18111 268 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 LalbaP29752 143 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 PpicP30412 212 aaKnown RBP13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Rims4P60191 269 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Slc7a10P63115 530 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Col9a1Q05722 921 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 CiartQ3TQ03 375 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr1204Q7TR10 309 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Pla2g16Q8R3U1 162 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 DhdhQ9DBB8 333 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Barx1Q9ER42 254 aa13.99□□□□□ -0.17
Shh-201ENSMUST00000002708 Trav15-2-dv6-2A0A075B650 123 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr1124A2AT86 318 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm3676D3Z236 184 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 G430095P16RikE9Q913 147 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Bcat2O35855 393 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 SgcbP82349 320 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Slc25a35Q5SWT3 300 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Map6Q7TSJ2 906 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Zfp729bQ80VN4 1045 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Osr2Q91ZD1 312 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 ApooQ9DCZ4 198 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Kcnk15B2RVL1 343 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Phlda2O08969 144 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Lef1P27782 397 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm9Q3UKW5 162 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Prdm6Q3UZD5 596 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Vash2Q8C5G2 355 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Abhd12Q99LR1 398 aaKnown RBP13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Smim8Q9CQQ0 97 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Q9CRC3 126 aa13.98□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm12887B1AVM1 119 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm6460F6YJZ8 199 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr117L7N1Z1 317 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 GzmaP11032 260 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 CryzP47199 331 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Chrna7P49582 502 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms