RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 J3QRK9 145 aa11.06□□□□□ -0.64
SRRM4-204ENST00000641899 REG1AP05451 166 aa11.06□□□□□ -0.64
SRRM4-204ENST00000641899 HIST1H1DP16402 221 aaKnown RBP11.06□□□□□ -0.64
SRRM4-204ENST00000641899 GNB3P16520 340 aa11.06□□□□□ -0.64
SRRM4-204ENST00000641899 TBCEQ15813 527 aaPredicted RBP11.06□□□□□ -0.64
SRRM4-204ENST00000641899 THOC7Q6I9Y2 204 aaKnown RBP11.06□□□□□ -0.64
SRRM4-204ENST00000641899 ZNF66Q6ZN08 573 aa11.06□□□□□ -0.64
SRRM4-204ENST00000641899 APRG1Q8IVJ8 170 aa11.06□□□□□ -0.64
SRRM4-204ENST00000641899 MAFIPQ8WZ33 124 aa11.06□□□□□ -0.64
SRRM4-204ENST00000641899 SPATA2Q9UM82 520 aa11.06□□□□□ -0.64
SRRM4-204ENST00000641899 KCNK7Q9Y2U2 307 aa11.06□□□□□ -0.64
SRRM4-204ENST00000641899 V9GY05 133 aa11.06□□□□□ -0.64
SRRM4-204ENST00000641899 PRSS29PA6NIE9 313 aa11.05□□□□□ -0.64
SRRM4-204ENST00000641899 C15orf62A8K5M9 175 aa11.05□□□□□ -0.64
SRRM4-204ENST00000641899 E7EUB6 86 aa11.05□□□□□ -0.64
SRRM4-204ENST00000641899 CA1P00915 261 aaPredicted RBP11.05□□□□□ -0.64
SRRM4-204ENST00000641899 HLA-DQB1P01920 261 aa11.05□□□□□ -0.64
SRRM4-204ENST00000641899 CD5P06127 495 aa11.05□□□□□ -0.64
SRRM4-204ENST00000641899 CTSDP07339 412 aaPredicted RBP11.05□□□□□ -0.64
SRRM4-204ENST00000641899 RPA2P15927 270 aa11.05□□□□□ -0.64
SRRM4-204ENST00000641899 DTYMKP23919 212 aa11.05□□□□□ -0.64
SRRM4-204ENST00000641899 CLDN12P56749 244 aa11.05□□□□□ -0.64
SRRM4-204ENST00000641899 LIPKQ5VXJ0 399 aa11.05□□□□□ -0.64
SRRM4-204ENST00000641899 SSX9Q7RTT3 188 aa11.05□□□□□ -0.64
SRRM4-204ENST00000641899 BET1LQ9NYM9 111 aa11.05□□□□□ -0.64
SRRM4-204ENST00000641899 OR2T8A6NH00 312 aa11.04□□□□□ -0.64
SRRM4-204ENST00000641899 MFNGO00587 321 aa11.04□□□□□ -0.64
SRRM4-204ENST00000641899 GABARAPO95166 117 aa11.04□□□□□ -0.64
SRRM4-204ENST00000641899 RPL30P62888 115 aaKnown RBP11.04□□□□□ -0.64
SRRM4-204ENST00000641899 TMEM41BQ5BJD5 291 aa11.04□□□□□ -0.64
SRRM4-204ENST00000641899 ZNF367Q7RTV3 350 aa11.04□□□□□ -0.64
SRRM4-204ENST00000641899 TMEM203Q969S6 136 aa11.04□□□□□ -0.64
SRRM4-204ENST00000641899 VPS13DQ5THJ4 4388 aa11.04□□□□□ -0.64
SRRM4-204ENST00000641899 TRAV10A0A0B4J240 114 aa11.03□□□□□ -0.64
SRRM4-204ENST00000641899 TMEM272A0A1B0GTI8 110 aa11.03□□□□□ -0.64
SRRM4-204ENST00000641899 RAB27BO00194 218 aa11.03□□□□□ -0.64
SRRM4-204ENST00000641899 PDCD5O14737 125 aa11.03□□□□□ -0.64
SRRM4-204ENST00000641899 FGF2P09038 288 aa11.03□□□□□ -0.64
SRRM4-204ENST00000641899 P0DMU3 169 aa11.03□□□□□ -0.64
SRRM4-204ENST00000641899 FAM231AP0DMU4 169 aa11.03□□□□□ -0.64
SRRM4-204ENST00000641899 FAM231CP0DMU5 169 aa11.03□□□□□ -0.64
SRRM4-204ENST00000641899 ZNF182P17025 639 aaPredicted RBP11.03□□□□□ -0.64
SRRM4-204ENST00000641899 CALRP27797 417 aaKnown RBP11.03□□□□□ -0.64
SRRM4-204ENST00000641899 RELQ04864 619 aaPredicted RBP11.03□□□□□ -0.64
SRRM4-204ENST00000641899 SPCS2Q15005 226 aa11.03□□□□□ -0.64
SRRM4-204ENST00000641899 MFSD4AQ8N468 514 aa11.03□□□□□ -0.64
SRRM4-204ENST00000641899 QTRT1Q9BXR0 403 aaKnown RBP11.03□□□□□ -0.64
SRRM4-204ENST00000641899 TAS2R8Q9NYW2 309 aa11.03□□□□□ -0.64
SRRM4-204ENST00000641899 A0A1B0GVY2 172 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 A0A1B0GW64 132 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 S1PR2O95136 353 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 EIF4EP06730 217 aaKnown RBP11.02□□□□□ -0.65
SRRM4-204ENST00000641899 RAB6AP20340 208 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 NFYAP23511 347 aaPredicted RBP11.02□□□□□ -0.65
SRRM4-204ENST00000641899 OR2B8PP59922 312 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 ARPC4P59998 168 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 CTF1Q16619 201 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 TIMM50Q3ZCQ8 353 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 SOHLH1Q5JUK2 328 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 PVRIGQ6DKI7 326 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 SLC25A24Q6NUK1 477 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 GDPD1Q8N9F7 314 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 TMEM116Q8NCL8 245 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 DCSTAMPQ9H295 470 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 C21orf62Q9NYP8 219 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 SMPXQ9UHP9 88 aa11.02□□□□□ -0.65
SRRM4-204ENST00000641899 IGHV4-4A0A075B6R2 117 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 C15orf61A6NNL5 157 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 DEFB4AO15263 64 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 DFFBO76075 338 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 TFPI2P48307 235 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 TAS2R31P59538 309 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 LSM3P62310 102 aaKnown RBP11.01□□□□□ -0.65
SRRM4-204ENST00000641899 CATR1Q13166 79 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 Q56UQ5 140 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 HES5Q5TA89 166 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 CNIH2Q6PI25 160 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 UBAC2Q8NBM4 344 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 GFI1Q99684 422 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 RNF126Q9BV68 326 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 RHPN1-AS1Q9BWJ2 59 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 ETV7Q9Y603 341 aa11.01□□□□□ -0.65
SRRM4-204ENST00000641899 IGLC7A0M8Q6 106 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 NUPL2O15504 423 aaKnown RBP11□□□□□ -0.65
SRRM4-204ENST00000641899 RBFOX2O43251 390 aaKnown RBP eCLIP11□□□□□ -0.65
SRRM4-204ENST00000641899 YIF1AO95070 293 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 HSMCR30P0CW71 290 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 MIFP14174 115 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 NQO2P16083 231 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 PLA2G7Q13093 441 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 MSMO1Q15800 293 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 STHQ8IWL8 128 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 SPAG16Q8N0X2 631 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 POM121L12Q8N7R1 296 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 ZBTB34Q8NCN2 500 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 DMBX1Q8NFW5 382 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 RNF2Q99496 336 aa11□□□□□ -0.65
SRRM4-204ENST00000641899 IGHV7-4-1A0A0J9YVY3 117 aa10.99□□□□□ -0.65
SRRM4-204ENST00000641899 DNASE2O00115 360 aaPredicted RBP10.99□□□□□ -0.65
SRRM4-204ENST00000641899 ZNF207O43670 478 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms