RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	MBD3L1	Q8WWY6	194 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	DNAJC30	Q96LL9	226 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	SRXN1	Q9BYN0	137 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	MRPL18	Q9H0U6	180 aa	Known RBP	6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	GP6	Q9HCN6	339 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	SH2D2A	Q9NP31	389 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	MBNL3	Q9NUK0	354 aa	Known RBP	6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	ZNF257	Q9Y2Q1	563 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	KMT2E	Q8IZD2	1858 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931		A0A1W2PS18	150 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	TNFSF11	O14788	317 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	IGHM	P01871	453 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	CT45A10	P0DMU9	189 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	PRTN3	P24158	256 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	GPR183	P32249	361 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	ERVK11-1	P61568	191 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	RPL8	P62917	257 aa	Known RBP	6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	TGFBR3	Q03167	851 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	PDCD1	Q15116	288 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	TBR1	Q16650	682 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	ADGRE4P	Q86SQ3	457 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	ZNF676	Q8N7Q3	588 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	SCCPDH	Q8NBX0	429 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	OR5D14	Q8NGL3	314 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	OR10G9	Q8NGN4	311 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	KCNG3	Q8TAE7	436 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	ZNF837	Q96EG3	531 aa	Predicted RBP	6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	OXGR1	Q96P68	337 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	PECR	Q9BY49	303 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	SPRY4	Q9C004	299 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	RAB9B	Q9NP90	201 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	C1RL	Q9NZP8	487 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	EMC9	Q9Y3B6	208 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	LINC00312	Q9Y6C7	94 aa		6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	PHF3	Q92576	2039 aa	Known RBP	6.67	□□□□□ -1.34
RTTN-223	ENST00000640931	AHCTF1	Q8WYP5	2266 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	IGLV3-32	A0A0A0MS00	114 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	LOC102725191	A0A1B0GVB3	256 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	CEBPZOS	A8MTT3	80 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	C21orf140	B9A014	251 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931		M0R2Z0	102 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	ISLR	O14498	428 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	HMGB3	O15347	200 aa	Known RBP	6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	MT-CO3	P00414	261 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	CA1	P00915	261 aa	Predicted RBP	6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	IGHG3	P01860	377 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	LIF	P15018	202 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	HTR1D	P28221	377 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	NTF4	P34130	210 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	FUT6	P51993	359 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	ZNF133	P52736	654 aa	Predicted RBP	6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	ZFAND6	Q6FIF0	208 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	MOGAT3	Q86VF5	341 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	ATOH7	Q8N100	152 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	GCSAM	Q8N6F7	178 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	EMG1	Q92979	244 aa	Known RBP	6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	C4orf45	Q96LM5	186 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	CLEC7A	Q9BXN2	247 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	OR2D2	Q9H210	308 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	UBTD1	Q9HAC8	227 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	TMEM160	Q9NX00	188 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	ALKBH4	Q9NXW9	302 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931	SIGLEC9	Q9Y336	463 aa		6.66	□□□□□ -1.34
RTTN-223	ENST00000640931		A0A0J9YW62	118 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931		E9PLN8	166 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	HIST1H1E	P10412	219 aa	Known RBP	6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	HIST1H1D	P16402	221 aa	Known RBP	6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	CLDN17	P56750	224 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	EWSR1	Q01844	656 aa	Known RBP eCLIP	6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	RTP5	Q14D33	572 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	TIGIT	Q495A1	244 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	HES3	Q5TGS1	186 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	SPATA12	Q7Z6I5	190 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	TMEM54	Q969K7	222 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	ZC2HC1A	Q96GY0	325 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	TRIB1	Q96RU8	372 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	SLC25A33	Q9BSK2	321 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	RBM24	Q9BX46	236 aa	Known RBP	6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	TM2D2	Q9BX73	214 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	MS4A6A	Q9H2W1	248 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	ANXA10	Q9UJ72	324 aa		6.65	□□□□□ -1.34
RTTN-223	ENST00000640931	ZNF850	A8MQ14	1090 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	RER1	O15258	196 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	SRSF10	O75494	262 aa	Known RBP	6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	PMCH	P20382	165 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	UQCRFS1	P47985	274 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	CLRN1	P58418	232 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	CATR1	Q13166	79 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	ZNF324B	Q6AW86	544 aa	Predicted RBP	6.65	□□□□□ -1.35
RTTN-223	ENST00000640931		Q6ZUT4	128 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	DEFB124	Q8NES8	71 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	OR8B3	Q8NGG8	313 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	OR8B2	Q96RD0	313 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	ASCL2	Q99929	193 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	TAS2R4	Q9NYW5	299 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	PRR13	Q9NZ81	148 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	B4GALT7	Q9UBV7	327 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	ANAPC10	Q9UM13	185 aa		6.65	□□□□□ -1.35
RTTN-223	ENST00000640931	CHD6	Q8TD26	2715 aa		6.65	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms