RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 IGKV1-27A0A075B6S5 117 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 TEX50A0A1B0GTY4 177 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 CIB4A0PJX0 185 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 MYL12BO14950 172 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 PSPHP1O15172 72 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 SMIM24O75264 130 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 PATE4P0C8F1 98 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 S100GP29377 79 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 H2BFSP57053 126 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 TAS2R19P59542 299 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 TWIST1Q15672 202 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 SRSF7Q16629 238 aaKnown RBP eCLIP5.46□□□□□ -1.54
NECAP1-220ENST00000639841 Q499Y3 187 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 GRINAQ7Z429 371 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 OR9I1Q8NGQ6 314 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 OR1S1Q8NH92 325 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 GRPEL2Q8TAA5 225 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 DIRAS2Q96HU8 199 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 RNF7Q9UBF6 113 aa5.46□□□□□ -1.54
NECAP1-220ENST00000639841 CR1P17927 2039 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 FAAHO00519 579 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 BHLHE40O14503 412 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 TCF21O43680 179 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 KBTBD11O94819 623 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 TTRP02766 147 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 OR13C7P0DN81 318 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 CD79AP11912 226 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 FKBP2P26885 142 aaKnown RBP5.45□□□□□ -1.54
NECAP1-220ENST00000639841 PMAIP1Q13794 54 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 KRTAP24-1Q3LI83 254 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 SMARCD3Q6STE5 483 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 COMMD6Q7Z4G1 85 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 SMIM29Q86T20 159 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 UBAC2Q8NBM4 344 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 OR13C6PQ8NH95 151 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 AURKBQ96GD4 344 aaPredicted RBP5.45□□□□□ -1.54
NECAP1-220ENST00000639841 SMIM8Q96KF7 97 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 RNASE7Q9H1E1 156 aaKnown RBP5.45□□□□□ -1.54
NECAP1-220ENST00000639841 MRPL27Q9P0M9 148 aaKnown RBP5.45□□□□□ -1.54
NECAP1-220ENST00000639841 HEATR5AQ86XA9 2040 aa5.45□□□□□ -1.54
NECAP1-220ENST00000639841 A0A1W2PQD3 144 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 PQLC2LA1A4F0 135 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 IGSF23A1L1A6 192 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 LINC00587B1AMM8 73 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 ZNF207O43670 478 aaKnown RBP5.44□□□□□ -1.54
NECAP1-220ENST00000639841 POLR2IP36954 125 aaKnown RBP5.44□□□□□ -1.54
NECAP1-220ENST00000639841 EFNA4P52798 201 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 TCTAP57738 103 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 RBMY1FQ15415 496 aaKnown RBP5.44□□□□□ -1.54
NECAP1-220ENST00000639841 GUCA2BQ16661 112 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 FAM78BQ5VT40 261 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 TEX36Q5VZQ5 186 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 LRRC18Q8N456 261 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 TMEM190Q8WZ59 177 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 SNX12Q9UMY4 172 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 A0A087X002 238 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 A0A096LNT2 108 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 FAM236DA0A1B0GTK5 79 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 PMS2P5A8MQ11 134 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 ZNF253O75346 499 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 DUSP14O95147 198 aaKnown RBP5.44□□□□□ -1.54
NECAP1-220ENST00000639841 SOD3P08294 240 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 CHTF8P0CG12 524 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 FAM236CP0DP71 79 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 RAB3AP20336 220 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 MAP2K4P45985 399 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 SURF2Q15527 256 aaPredicted RBP5.44□□□□□ -1.54
NECAP1-220ENST00000639841 NNATQ16517 81 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 C5orf46Q6UWT4 87 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 ZNF493Q6ZR52 646 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 CTAGE3PQ8IX95 158 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 SLC35G3Q8N808 338 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 OR52L1Q8NGH7 329 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 OR4S2Q8NH73 311 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 C10orf105Q8TEF2 133 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 ITLN1Q8WWA0 313 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 ZNF184Q99676 751 aaPredicted RBP5.44□□□□□ -1.54
NECAP1-220ENST00000639841 SAMD10Q9BYL1 202 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 TMEM138Q9NPI0 162 aa5.44□□□□□ -1.54
NECAP1-220ENST00000639841 KLLNB2CW77 178 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 PHBP35232 272 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 RHOBP62745 196 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 BSPH1Q075Z2 132 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 PRDX4Q13162 271 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 ZNF239Q16600 458 aaKnown RBP5.43□□□□□ -1.54
NECAP1-220ENST00000639841 SLC16A13Q7RTY0 426 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 MCFD2Q8NI22 146 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 RXFP4Q8TDU9 374 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 TSC22D3Q99576 134 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 TMPRSS5Q9H3S3 457 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 JPT2Q9H910 190 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 RNF11Q9Y3C5 154 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 HSPB11Q9Y547 144 aa5.43□□□□□ -1.54
NECAP1-220ENST00000639841 ZNF469Q96JG9 3925 aaPredicted RBP5.43□□□□□ -1.54
NECAP1-220ENST00000639841 ABCA1O95477 2261 aa5.42□□□□□ -1.54
NECAP1-220ENST00000639841 PLAC8L1A1L4L8 177 aa5.42□□□□□ -1.54
NECAP1-220ENST00000639841 OR5H1A6NKK0 313 aa5.42□□□□□ -1.54
NECAP1-220ENST00000639841 BANF1O75531 89 aa5.42□□□□□ -1.54
NECAP1-220ENST00000639841 LYPLA1O75608 230 aaPredicted RBP5.42□□□□□ -1.54
NECAP1-220ENST00000639841 OR2A4O95047 310 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms