RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 PLIN2Q99541 437 aa-2.6□□□□□ -2.83
LMBR1-222ENST00000638959 ELOVL6Q9H5J4 265 aa-2.6□□□□□ -2.83
LMBR1-222ENST00000638959 TMEM138Q9NPI0 162 aa-2.6□□□□□ -2.83
LMBR1-222ENST00000638959 GPRASP1Q5JY77 1395 aa-2.61□□□□□ -2.83
LMBR1-222ENST00000638959 NBPF19A0A087WUL8 3843 aa-2.61□□□□□ -2.83
LMBR1-222ENST00000638959 A0A1B0GW54 56 aa-2.61□□□□□ -2.83
LMBR1-222ENST00000638959 INMT-MINDY4F8WBC2 141 aa-2.61□□□□□ -2.83
LMBR1-222ENST00000638959 GOLGA8RI6L899 631 aa-2.61□□□□□ -2.83
LMBR1-222ENST00000638959 CCT6AP40227 531 aaKnown RBP-2.61□□□□□ -2.83
LMBR1-222ENST00000638959 OR52K2Q8NGK3 314 aa-2.61□□□□□ -2.83
LMBR1-222ENST00000638959 RAB2BQ8WUD1 216 aa-2.61□□□□□ -2.83
LMBR1-222ENST00000638959 MS4A6EQ96DS6 147 aa-2.61□□□□□ -2.83
LMBR1-222ENST00000638959 CENPNQ96H22 339 aaPredicted RBP-2.61□□□□□ -2.83
LMBR1-222ENST00000638959 GCNT4Q9P109 453 aa-2.61□□□□□ -2.83
LMBR1-222ENST00000638959 SNX24Q9Y343 169 aa-2.61□□□□□ -2.83
LMBR1-222ENST00000638959 GGT3PA6NGU5 568 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 TVP23AA6NH52 213 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 LRRIQ4A6NIV6 560 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 H3BRM9 83 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 M0R381 172 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 HLA-DQB2P05538 268 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 RCVRNP35243 200 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 CSN1S1P47710 185 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 TMEM33P57088 247 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 ATP5L2Q7Z4Y8 100 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 CMTM8Q8IZV2 173 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 OR4E2Q8NGC2 313 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 OR2AE1Q8NHA4 323 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 Q8WTZ3 238 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 NAT14Q8WUY8 206 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 ANKRD7Q92527 254 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 LYSMD1Q96S90 227 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 GEMIN7Q9H840 131 aaKnown RBP-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 SLC39A9Q9NUM3 307 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 EMC3Q9P0I2 261 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 BLOC1S6Q9UL45 172 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 RAB3GAP2Q9H2M9 1393 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 CADP27708 2225 aa-2.62□□□□□ -2.83
LMBR1-222ENST00000638959 USP9YO00507 2555 aaPredicted RBP-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 PTPRFP10586 1907 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 SPRR2AP35326 72 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 ARR3P36575 388 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 KRTAP6-2Q3LI66 62 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 HBMQ6B0K9 141 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 TMEM53Q6P2H8 277 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 ST6GALNAC3Q8NDV1 305 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 OR2T27Q8NH04 317 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 OR10J5Q8NHC4 309 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 CDKL2Q92772 493 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 LRRC45Q96CN5 670 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 RMND5BQ96G75 393 aaPredicted RBP-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 SDHAF2Q9NX18 166 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 TAS2R13Q9NYV9 303 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 UNC13BO14795 1591 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 INSRP06213 1382 aa-2.63□□□□□ -2.83
LMBR1-222ENST00000638959 JMJD7-PLA2G4BH0Y9G9 81 aa-2.64□□□□□ -2.83
LMBR1-222ENST00000638959 CXCL11O14625 94 aa-2.64□□□□□ -2.83
LMBR1-222ENST00000638959 SPRR2EP22531 72 aa-2.64□□□□□ -2.83
LMBR1-222ENST00000638959 TUBG1P23258 451 aa-2.64□□□□□ -2.83
LMBR1-222ENST00000638959 ATP5IP56385 69 aaPredicted RBP-2.64□□□□□ -2.83
LMBR1-222ENST00000638959 SNAP25P60880 206 aa-2.64□□□□□ -2.83
LMBR1-222ENST00000638959 EIF3MQ7L2H7 374 aaKnown RBP-2.64□□□□□ -2.83
LMBR1-222ENST00000638959 SSX8Q7RTT4 187 aa-2.64□□□□□ -2.83
LMBR1-222ENST00000638959 TLCD1Q96CP7 247 aa-2.64□□□□□ -2.83
LMBR1-222ENST00000638959 LYRM4Q9HD34 91 aa-2.64□□□□□ -2.83
LMBR1-222ENST00000638959 LZTFL1Q9NQ48 299 aa-2.64□□□□□ -2.83
LMBR1-222ENST00000638959 MED13LQ71F56 2210 aa-2.64□□□□□ -2.83
LMBR1-222ENST00000638959 CHD2O14647 1828 aaKnown RBP-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 PRORSD1PA6NEY8 169 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 PPYP01298 95 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 IL6P05231 212 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 CSKP41240 450 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 BSXQ3C1V8 233 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 CCDC184Q52MB2 194 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 GLT8D1Q68CQ7 371 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 ULK3Q6PHR2 472 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 DPPA3Q6W0C5 159 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 CASC2Q6XLA1 102 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 NATD1Q8N6N6 113 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 METTL9Q9H1A3 318 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 PSME2Q9UL46 239 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 CECR2Q9BXF3 1484 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 CSPG4Q6UVK1 2322 aa-2.65□□□□□ -2.83
LMBR1-222ENST00000638959 TRAV8-1A0A0A6YYK1 113 aa-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 K7EN84 100 aa-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 CAV3P56539 151 aa-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 DSTNP60981 165 aa-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 LCN2P80188 198 aa-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 RPL18Q07020 188 aaKnown RBP-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 C1DQ13901 141 aaKnown RBP-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 TRIP13Q15645 432 aaPredicted RBP-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 KISS1Q15726 138 aa-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 KLK9Q2XQG4 91 aa-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 MESTQ5EB52 335 aa-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 CIDECQ96AQ7 238 aaPredicted RBP-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 RASD2Q96D21 266 aa-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 MYCBPQ99417 103 aaPredicted RBP-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 PARD6GQ9BYG4 376 aaPredicted RBP-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 HS3ST2Q9Y278 367 aa-2.66□□□□□ -2.84
LMBR1-222ENST00000638959 CHCHD2Q9Y6H1 151 aaPredicted RBP-2.66□□□□□ -2.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms