RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SLC25A24Q6NUK1 477 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 SGPP2Q8IWX5 399 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 Q8N402 240 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 OR10W1Q8NGF6 305 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 TSC22D3Q99576 134 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 BCL7BQ9BQE9 202 aa10.51□□□□□ -0.73
PNKP-228ENST00000637325 FAM212BQ9NTI7 297 aaPredicted RBP10.51□□□□□ -0.73
PNKP-228ENST00000637325 GABARAPH6UMI1 98 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 SERPINE2P07093 398 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 FRMD6-AS1P0C7T7 363 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 RPL5P46777 297 aaKnown RBP10.5□□□□□ -0.73
PNKP-228ENST00000637325 MRPS10P82664 201 aaKnown RBP10.5□□□□□ -0.73
PNKP-228ENST00000637325 KLK9Q2XQG4 91 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 SCGB2B2Q4G0G5 96 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 FAM106AQ4KMX7 169 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 H2BFWTQ7Z2G1 175 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 GTSCR1Q86UQ5 136 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 LAX1Q8IWV1 398 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 CADM3Q8N126 398 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 ARRDC1Q8N5I2 433 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 TMEM229BQ8NBD8 167 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 OR4A16Q8NH70 328 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 LSM10Q969L4 123 aaKnown RBP10.5□□□□□ -0.73
PNKP-228ENST00000637325 ZNF486Q96H40 463 aaPredicted RBP10.5□□□□□ -0.73
PNKP-228ENST00000637325 CCDC140Q96MF4 163 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 TMEM56Q96MV1 263 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 WWC2-AS2Q96NR7 200 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 MIXL1Q9H2W2 232 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 KLK9Q9UKQ9 250 aa10.5□□□□□ -0.73
PNKP-228ENST00000637325 ZNF320A2RRD8 509 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 MFSD2BA6NFX1 497 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 RAB3DO95716 219 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 CLEC3BP05452 202 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 PI3P19957 117 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 PPP5CP53041 499 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 PIGPP57054 158 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 IL18Q14116 193 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 GPHB5Q86YW7 130 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 SBSPONQ8IVN8 264 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 GDPD1Q8N9F7 314 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 OR2K2Q8NGT1 345 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 OR5B3Q8NH48 314 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 ZFAND1Q8TCF1 268 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 DIRAS2Q96HU8 199 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 C6orf62Q9GZU0 229 aaPredicted RBP10.49□□□□□ -0.73
PNKP-228ENST00000637325 ZC4H2Q9NQZ6 224 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 NDUFA4L2Q9NRX3 87 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 CCDC59Q9P031 241 aaKnown RBP10.49□□□□□ -0.73
PNKP-228ENST00000637325 COPZ2Q9P299 210 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 RABL2AQ9UBK7 228 aaPredicted RBP10.49□□□□□ -0.73
PNKP-228ENST00000637325 RABL2BQ9UNT1 228 aa10.49□□□□□ -0.73
PNKP-228ENST00000637325 HUWE1Q7Z6Z7 4374 aaKnown RBP10.49□□□□□ -0.73
PNKP-228ENST00000637325 C2orf70A6NJV1 201 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 C15orf61A6NNL5 157 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 LGALS9O00182 355 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 PTBP1P26599 531 aaKnown RBP eCLIP10.48□□□□□ -0.73
PNKP-228ENST00000637325 RND3P61587 244 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 SSBP1Q04837 148 aaKnown RBP10.48□□□□□ -0.73
PNKP-228ENST00000637325 WT1-ASQ06250 92 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 STEAP1BQ6NZ63 245 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 PLET1Q6UQ28 207 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 LHFPL1Q86WI0 220 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 CCDC71LQ8N9Z2 235 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 TERB2Q8NHR7 220 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 DYNC2LI1Q8TCX1 351 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 MRGPRFQ96AM1 343 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 SEC22AQ96IW7 307 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 DMRT1Q9Y5R6 373 aa10.48□□□□□ -0.73
PNKP-228ENST00000637325 IZUMO1RA6ND01 250 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 ATG12O94817 140 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 CD74P04233 296 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 IGHV4-30-4P0DP06 118 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 FOLR2P14207 255 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 GPR183P32249 361 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 MEF2DQ14814 521 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 CD300EQ496F6 205 aaPredicted RBP10.47□□□□□ -0.73
PNKP-228ENST00000637325 Q8N1Y9 231 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 OR4D10Q8NGI6 311 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 OR1L6Q8NGR2 347 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 ZNF502Q8TBZ5 544 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 VN1R17PQ8TDU5 208 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 TUBA4BQ9H853 241 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 ZMAT4Q9H898 229 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 PALMDQ9NP74 551 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 TMEM14BQ9NUH8 114 aa10.47□□□□□ -0.73
PNKP-228ENST00000637325 TECRQ9NZ01 308 aaKnown RBP10.47□□□□□ -0.73
PNKP-228ENST00000637325 F11RQ9Y624 299 aaKnown RBP10.47□□□□□ -0.73
PNKP-228ENST00000637325 IGHV3-21A0A0B4J1V1 117 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 C3orf85A0A1B0GTC6 90 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 DBX1A6NMT0 343 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 DISC1C4P0D8 188 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 IGKV1-39P01597 117 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 IGKV1D-39P04432 117 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 GUCA2BQ16661 112 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 TRIM16LQ309B1 348 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 DEFB114Q30KQ6 69 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 ADAMTSL5Q6ZMM2 481 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 OR13C8Q8NGS7 320 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 MARCH1Q8TCQ1 289 aa10.46□□□□□ -0.73
PNKP-228ENST00000637325 SMIM4Q8WVI0 70 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms