RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 TEX50A0A1B0GTY4 177 aa13.42□□□□□ -0.26
CLN6-218ENST00000637223 C15orf61A6NNL5 157 aa13.42□□□□□ -0.26
CLN6-218ENST00000637223 RBMXL2O75526 392 aaKnown RBP13.42□□□□□ -0.26
CLN6-218ENST00000637223 SFT2D2O95562 160 aa13.42□□□□□ -0.26
CLN6-218ENST00000637223 P0C879 139 aa13.42□□□□□ -0.26
CLN6-218ENST00000637223 UBE2MP61081 183 aaKnown RBP13.42□□□□□ -0.26
CLN6-218ENST00000637223 TATDN3Q17R31 274 aa13.42□□□□□ -0.26
CLN6-218ENST00000637223 C18orf65Q6ZTR6 163 aa13.42□□□□□ -0.26
CLN6-218ENST00000637223 RNF152Q8N8N0 203 aa13.42□□□□□ -0.26
CLN6-218ENST00000637223 OR5M8Q8NGP6 311 aa13.42□□□□□ -0.26
CLN6-218ENST00000637223 TMEM68Q96MH6 324 aa13.42□□□□□ -0.26
CLN6-218ENST00000637223 HINT2Q9BX68 163 aa13.42□□□□□ -0.26
CLN6-218ENST00000637223 ZNF355PQ9NSJ1 428 aa13.42□□□□□ -0.26
CLN6-218ENST00000637223 TRAV6A0A075B6T7 132 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 SNRPGP15A8MWD9 76 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 M0QZ24 198 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 FGF2P09038 288 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 AREGP15514 252 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 RAB9AP51151 201 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 RPL23AP62750 156 aaKnown RBP13.41□□□□□ -0.26
CLN6-218ENST00000637223 C2orf68Q2NKX9 166 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 ANKRD55Q3KP44 614 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 C19orf35Q6ZS72 473 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 LGI3Q8N145 548 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 SLC35G3Q8N808 338 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 OR1L8Q8NGR8 309 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 FAM110DQ8TAY7 271 aaPredicted RBP13.41□□□□□ -0.26
CLN6-218ENST00000637223 IL22RA2Q969J5 263 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 QTRT1Q9BXR0 403 aaKnown RBP13.41□□□□□ -0.26
CLN6-218ENST00000637223 GPN1Q9HCN4 374 aaPredicted RBP13.41□□□□□ -0.26
CLN6-218ENST00000637223 TMEM14BQ9NUH8 114 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 COA4Q9NYJ1 87 aa13.41□□□□□ -0.26
CLN6-218ENST00000637223 A0A0B4J293 547 aa13.4□□□□□ -0.26
CLN6-218ENST00000637223 NUDT19A8MXV4 375 aa13.4□□□□□ -0.26
CLN6-218ENST00000637223 TSPAN15O95858 294 aa13.4□□□□□ -0.26
CLN6-218ENST00000637223 HLA-AP01891 365 aaKnown RBP13.4□□□□□ -0.26
CLN6-218ENST00000637223 REG1AP05451 166 aa13.4□□□□□ -0.26
CLN6-218ENST00000637223 OR4E1P0C645 316 aa13.4□□□□□ -0.26
CLN6-218ENST00000637223 SRPXP78539 464 aa13.4□□□□□ -0.26
CLN6-218ENST00000637223 C4orf46Q504U0 113 aa13.4□□□□□ -0.26
CLN6-218ENST00000637223 LYZL2Q7Z4W2 148 aa13.4□□□□□ -0.26
CLN6-218ENST00000637223 OR10W1Q8NGF6 305 aa13.4□□□□□ -0.26
CLN6-218ENST00000637223 GPR146Q96CH1 333 aa13.4□□□□□ -0.26
CLN6-218ENST00000637223 ZFP57Q9NU63 452 aa13.4□□□□□ -0.26
CLN6-218ENST00000637223 FKBP11Q9NYL4 201 aa13.4□□□□□ -0.26
CLN6-218ENST00000637223 PLXNB1O43157 2135 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 C9orf170A2RU37 121 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 PFDN1O60925 122 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 PRH1P02810 166 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 TRGV3P03979 118 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 TPPP2P59282 170 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 DEFA5Q01523 94 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 Q6ZRM9 215 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 FAM219AQ8IW50 185 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 TTC9CQ8N5M4 171 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 KLHL30-AS1Q8NEE0 82 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 OR5B3Q8NH48 314 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 NDUFA4L2Q9NRX3 87 aa13.39□□□□□ -0.27
CLN6-218ENST00000637223 hCG_2014768A0A024R1R8 64 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 A0A0B4J2A0 478 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 IGLC7A0M8Q6 106 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 PSMB6P28072 239 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 RAB25P57735 213 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 DHRS2Q13268 280 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 KIAA0141Q14154 515 aaPredicted RBP13.38□□□□□ -0.27
CLN6-218ENST00000637223 SPINK9Q5DT21 86 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 C8orf86Q6ZUL3 223 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 LYG2Q86SG7 212 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 ZNF491Q8N8L2 437 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 MYOZ3Q8TDC0 251 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 LSM10Q969L4 123 aaKnown RBP13.38□□□□□ -0.27
CLN6-218ENST00000637223 OR5B12Q96R08 314 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 GNB4Q9HAV0 340 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 CACNG5Q9UF02 275 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 SHPKQ9UHJ6 478 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 ALG5Q9Y673 324 aa13.38□□□□□ -0.27
CLN6-218ENST00000637223 NPIPB5A8MRT5 1133 aa13.37□□□□□ -0.27
CLN6-218ENST00000637223 H3BUA1 57 aa13.37□□□□□ -0.27
CLN6-218ENST00000637223 ST8SIA3O43173 380 aa13.37□□□□□ -0.27
CLN6-218ENST00000637223 HSPE1P61604 102 aaKnown RBP13.37□□□□□ -0.27
CLN6-218ENST00000637223 TREML4Q6UXN2 200 aa13.37□□□□□ -0.27
CLN6-218ENST00000637223 OR52B4Q8NGK2 314 aa13.37□□□□□ -0.27
CLN6-218ENST00000637223 SRSF8Q9BRL6 282 aaKnown RBP13.37□□□□□ -0.27
CLN6-218ENST00000637223 SLA2Q9H6Q3 261 aa13.37□□□□□ -0.27
CLN6-218ENST00000637223 ZNF257Q9Y2Q1 563 aa13.37□□□□□ -0.27
CLN6-218ENST00000637223 IFNA17P01571 189 aa13.36□□□□□ -0.27
CLN6-218ENST00000637223 IGHV3-11P01762 117 aa13.36□□□□□ -0.27
CLN6-218ENST00000637223 CRYGCP07315 174 aa13.36□□□□□ -0.27
CLN6-218ENST00000637223 OR13C7P0DN81 318 aa13.36□□□□□ -0.27
CLN6-218ENST00000637223 CTRB1P17538 263 aa13.36□□□□□ -0.27
CLN6-218ENST00000637223 CDX1P47902 265 aaPredicted RBP13.36□□□□□ -0.27
CLN6-218ENST00000637223 PRCDQ00LT1 54 aa13.36□□□□□ -0.27
CLN6-218ENST00000637223 WT1-ASQ06250 92 aa13.36□□□□□ -0.27
CLN6-218ENST00000637223 NMSQ5H8A3 153 aa13.36□□□□□ -0.27
CLN6-218ENST00000637223 CTRB2Q6GPI1 263 aa13.36□□□□□ -0.27
CLN6-218ENST00000637223 THOC7Q6I9Y2 204 aaKnown RBP13.36□□□□□ -0.27
CLN6-218ENST00000637223 ZNF429Q86V71 674 aa13.36□□□□□ -0.27
CLN6-218ENST00000637223 LRTM2Q8N967 370 aa13.36□□□□□ -0.27
CLN6-218ENST00000637223 UBE2E2Q96LR5 201 aa13.36□□□□□ -0.27
CLN6-218ENST00000637223 PDCD10Q9BUL8 212 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms