RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	ARPC5	O15511	151 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	HOXA3	O43365	443 aa	Predicted RBP	7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	GPR137B	O60478	399 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	TSC22D2	O75157	780 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	LY86	O95711	162 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	IAPP	P10997	89 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	RPL27A	P46776	148 aa	Known RBP	7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	HOXA1	P49639	335 aa	Predicted RBP	7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	NKX2-5	P52952	324 aa	Predicted RBP	7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	GNB1	P62873	340 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	VAMP2	P63027	116 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	CX3CL1	P78423	397 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	SCGB2A2	Q13296	93 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	ZNF546	Q86UE3	836 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	TMEM86B	Q8N661	226 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	SRSF12	Q8WXF0	261 aa	Known RBP	7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	CIB3	Q96Q77	187 aa	Predicted RBP	7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	GSX1	Q9H4S2	264 aa	Predicted RBP	7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	PLEKHA3	Q9HB20	300 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	LYRM2	Q9NU23	88 aa	Predicted RBP	7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	VPREB3	Q9UKI3	123 aa		7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	PAIP2B	Q9ULR5	123 aa	Known RBP	7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058	SETX	Q7Z333	2677 aa	Known RBP	7.6	□□□□□ -1.19
CACNA1A-223	ENST00000636058		A0A1W2PN81	502 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	IGLC7	A0M8Q6	106 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	RNF222	A6NCQ9	220 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	MSGN1	A6NI15	193 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	TEX22	C9J3V5	150 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	KCNAB3	O43448	404 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	HKR1	P10072	659 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	SRD5A1	P18405	259 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	CHRNA7	P36544	502 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	CAV2	P51636	162 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	RPL23A	P62750	156 aa	Known RBP	7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	NDP	Q00604	133 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	WT1-AS	Q06250	92 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	ZNF345	Q14585	488 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	FXYD3	Q14802	87 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	C9orf62	Q8N4C0	152 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	OR2C3	Q8N628	320 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	OR10W1	Q8NGF6	305 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	ARPC1A	Q92747	370 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	AQP10	Q96PS8	301 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	HSPB9	Q9BQS6	159 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	SRSF8	Q9BRL6	282 aa	Known RBP	7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	HINT2	Q9BX68	163 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	MFF	Q9GZY8	342 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	HIPK2	Q9H2X6	1198 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	ENY2	Q9NPA8	101 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	HEYL	Q9NQ87	328 aa	Predicted RBP	7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	PSENEN	Q9NZ42	101 aa		7.59	□□□□□ -1.19
CACNA1A-223	ENST00000636058	IGSF23	A1L1A6	192 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	FAM24A	A6NFZ4	105 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	SH2D7	A6NKC9	451 aa	Predicted RBP	7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	INAFM1	C9JVW0	142 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058		H3BP45	60 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	CNIH1	O95406	144 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	CXCL2	P19875	107 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	RPL12	P30050	165 aa	Known RBP	7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	BSX	Q3C1V8	233 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	LGALSL	Q3ZCW2	172 aa	Predicted RBP	7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	LAMTOR1	Q6IAA8	161 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	TMEM14EP	Q6UXP3	125 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	RBMS3	Q6XE24	437 aa	Known RBP	7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	ACOT7L	Q6ZUV0	252 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058		Q71RC1	249 aa	Predicted RBP	7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	MRPL41	Q8IXM3	137 aa	Known RBP	7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	TMEM252	Q8N6L7	170 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	INO80E	Q8NBZ0	244 aa	Predicted RBP	7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	OR4C12	Q96R67	309 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	FBXO7	Q9Y3I1	522 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058		U3KQ87	197 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	HIVEP1	P15822	2718 aa		7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	SON	P18583	2426 aa	Known RBP	7.58	□□□□□ -1.2
CACNA1A-223	ENST00000636058	PLXNB1	O43157	2135 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	DNAJC9-AS1	A6NH13	148 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	C15orf62	A8K5M9	175 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	EGR2	P11161	476 aa	Predicted RBP	7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	AREG	P15514	252 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	NUP62	P37198	522 aa	Predicted RBP	7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	HTR2B	P41595	481 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	BLCAP	P62952	87 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	RPP30	P78346	268 aa	Known RBP	7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	ERH	P84090	104 aa	Known RBP	7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	EWSR1	Q01844	656 aa	Known RBP eCLIP	7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	OR2F1	Q13607	317 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	SPANXN5	Q5MJ07	72 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	ASPHD1	Q5U4P2	390 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	KCNRG	Q8N5I3	272 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	ZNF114	Q8NC26	417 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	SLC24A4	Q8NFF2	622 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	TMEM170A	Q8WVE7	144 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	FAM103A1	Q9BTL3	118 aa	Known RBP	7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	SLC25A31	Q9H0C2	315 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	TNFRSF19	Q9NS68	423 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	STRAP	Q9Y3F4	350 aa	Known RBP	7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	ZFHX3	Q15911	3703 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	HIVEP2	P31629	2446 aa		7.57	□□□□□ -1.2
CACNA1A-223	ENST00000636058	MXRA5	Q9NR99	2828 aa		7.56	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms