RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	SPATA25	Q9BR10	227 aa		5.52	□□□□□ -1.53
CACNA1A-222	ENST00000636022	ZC4H2	Q9NQZ6	224 aa		5.52	□□□□□ -1.53
CACNA1A-222	ENST00000636022	BET1L	Q9NYM9	111 aa		5.52	□□□□□ -1.53
CACNA1A-222	ENST00000636022	MBD2	Q9UBB5	411 aa		5.52	□□□□□ -1.53
CACNA1A-222	ENST00000636022	FBXL7	Q9UJT9	491 aa		5.52	□□□□□ -1.53
CACNA1A-222	ENST00000636022	IGLV11-55	A0A075B6I3	123 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	TRAV3	A0A0B4J244	114 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	LCE6A	A0A183	80 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	TMEM127	O75204	238 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	GGCT	O75223	188 aa	Known RBP	5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	OR2C1	O95371	312 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	IGHV3-23	P01764	117 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	FGF2	P09038	288 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	CD7	P09564	240 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	GNRHR	P30968	328 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	TGFBR1	P36897	503 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	TAS2R31	P59538	309 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	OR2B8P	P59922	312 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	CD81	P60033	236 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	NEDD8	Q15843	81 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	POU2AF1	Q16633	256 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	TIMM50	Q3ZCQ8	353 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	ZFAND6	Q6FIF0	208 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	ZNF818P	Q6ZRF7	136 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	SSX9	Q7RTT3	188 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	ZNF680	Q8NEM1	530 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	OR5AP2	Q8NGF4	316 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	ISOC1	Q96CN7	298 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	SLC5A7	Q9GZV3	580 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	TUBA4B	Q9H853	241 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	PLEKHA3	Q9HB20	300 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	DIABLO	Q9NR28	239 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	GAR1	Q9NY12	217 aa	Known RBP	5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	TECR	Q9NZ01	308 aa	Known RBP	5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	ANAPC10	Q9UM13	185 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022		S4R3C0	116 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	DNAH6	Q9C0G6	4158 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	VPS13D	Q5THJ4	4388 aa		5.51	□□□□□ -1.53
CACNA1A-222	ENST00000636022	IGLC7	A0M8Q6	106 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	TMEM213	A2RRL7	107 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	RBMY1B	A6NDE4	496 aa	Known RBP	5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	RBMY1E	A6NEQ0	496 aa	Known RBP	5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022		A8MWP6	167 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	SULT1C2	O00338	296 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	UPK2	O00526	184 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	XRCC3	O43542	346 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	DHFR	P00374	187 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	HPRT1	P00492	218 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	REG1A	P05451	166 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	CLEC3B	P05452	202 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	FCER2	P06734	321 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	RBMY1D	P0C7P1	496 aa	Known RBP	5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	NQO2	P16083	231 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	HIST1H1B	P16401	226 aa	Known RBP	5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	CBLN1	P23435	193 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	ARL3	P36405	182 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	RPS19	P39019	145 aa	Known RBP	5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	LCE2C	Q5TA81	110 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	DHRS11	Q6UWP2	260 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	CLEC19A	Q6UXS0	136 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	DEFB125	Q8N687	156 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	CACNG8	Q8WXS5	425 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	EEF1AKMT3	Q96AZ1	226 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	WDR89	Q96FK6	387 aa	Predicted RBP	5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	WFDC10A	Q9H1F0	79 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	HIPK2	Q9H2X6	1198 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	RETN	Q9HD89	108 aa		5.5	□□□□□ -1.53
CACNA1A-222	ENST00000636022	TRBV7-1	A0A0A6YYK4	115 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	MEIS3P1	A6NDR6	274 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	MFSD2B	A6NFX1	497 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	CCDC160	A6NGH7	325 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	S1PR2	O95136	353 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	SNAPIN	O95295	136 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	IFNA6	P05013	189 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	C8orf88	P0DMB2	117 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	FXYD4	P59646	89 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	VBP1	P61758	197 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	CATR1	Q13166	79 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	ZNF124	Q15973	351 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	FAM106A	Q4KMX7	169 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	UNQ9165/PRO28630	Q6UXU0	137 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	LINC00299	Q6ZSB3	139 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	TMEM61	Q8N0U2	210 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	OR51H1	Q8NH63	302 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	ZNF502	Q8TBZ5	544 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	CD300LF	Q8TDQ1	290 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	DYNLRB2	Q8TF09	96 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	YIPF6	Q96EC8	236 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	S100A16	Q96FQ6	103 aa	Known RBP	5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	CXorf58	Q96LI9	332 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	SRSF8	Q9BRL6	282 aa	Known RBP	5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	SRD5A3	Q9H8P0	318 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	PLEKHA2	Q9HB19	425 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	HRASLS	Q9HDD0	168 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	TMEM140	Q9NV12	185 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	SLC2A8	Q9NY64	477 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	COMMD9	Q9P000	198 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	MLX	Q9UH92	298 aa		5.49	□□□□□ -1.53
CACNA1A-222	ENST00000636022	TEX50	A0A1B0GTY4	177 aa		5.48	□□□□□ -1.53
CACNA1A-222	ENST00000636022	ZNF320	A2RRD8	509 aa		5.48	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms