RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 TIMM13Q9Y5L4 95 aaPredicted RBP3.28□□□□□ -1.89
R3HDM1-220ENST00000628915 COL4A5P29400 1685 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 TRBV24-1A0A075B6N3 115 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 A0A087WUU8 490 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 SMIM28A0A1B0GU29 152 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 DLL1O00548 723 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 PFN1P07737 140 aaKnown RBP3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 MYOD1P15172 320 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 BLVRBP30043 206 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 PFN2P35080 140 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 CSN1S1P47710 185 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 CLDN2P57739 230 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 RPS4XP62701 263 aaKnown RBP3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 VAX1Q5SQQ9 334 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 SAMD5Q5TGI4 173 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 Q6ZT83 130 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 COMMD6Q7Z4G1 85 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 ZNF101Q8IZC7 436 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 TMEM54Q969K7 222 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 DNAJA3Q96EY1 480 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 TMEM191AQ9H0A3 160 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 SH3BGRL3Q9H299 93 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 ZFAND3Q9H8U3 227 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 MCTS1Q9ULC4 181 aaKnown RBP3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 NUP214P35658 2090 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 KALRNO60229 2985 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 LTBP2Q14767 1821 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 TRAV9-2A0A087WT02 112 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 CHEK1O14757 476 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 DANCRP0C864 163 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 SMIM13P0DJ93 91 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 ZNF43P17038 809 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 GABRG2P18507 467 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 RPS4Y1P22090 263 aaKnown RBP3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 EMDP50402 254 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 PHLDA2Q53GA4 152 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 Q56UQ5 140 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 PPP1R32Q7Z5V6 425 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 ZNF584Q8IVC4 421 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 THAP8Q8NA92 274 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 WFDC11Q8NEX6 87 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 OR8B3Q8NGG8 313 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 OR51H1Q8NH63 302 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 SGMS2Q8NHU3 365 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 SAP25Q8TEE9 199 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 C16orf92Q96LL3 132 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 ZNF681Q96N22 645 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 RNF126Q9BV68 326 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 A8MWV9 139 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 H3BRM9 83 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 SDCBPO00560 298 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 SPINT2O43291 252 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 CXCL13O43927 109 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 GPR137BO60478 399 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 IGLV3-25P01717 112 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 TACSTD2P09758 323 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 FGF6P10767 208 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 SFTPDP35247 375 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 CCL23P55773 120 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 C1orf61Q13536 156 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 ECSCRQ19T08 205 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 VMA21Q3ZAQ7 101 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 Q6ZVL8 140 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 TPRX1Q8N7U7 411 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 OR4F17Q8NGA8 305 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 OR4F5Q8NH21 305 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 NEUROG1Q92886 237 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 OR4F4Q96R69 305 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 MCHR1Q99705 422 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 AP5S1Q9NUS5 200 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 TP53TG1Q9Y2A0 90 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 INSL5Q9Y5Q6 135 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 ANK1P16157 1881 aa3.27□□□□□ -1.89
R3HDM1-220ENST00000628915 A0A0A6YYD5 115 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 NDUFA7O95182 113 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 ACVRL1P37023 503 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 RND2P52198 227 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 RPS28P62857 69 aaKnown RBP3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 SLC38A11Q08AI6 406 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 LEG1Q6P5S2 330 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 TMEM86BQ8N661 226 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 GATD1Q8NB37 220 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 OVCA2Q8WZ82 227 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 SLC25A44Q96H78 314 aaPredicted RBP3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 C2orf50Q96LR7 162 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 KIR2DL4Q99706 377 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 ZNF703Q9H7S9 590 aaPredicted RBP3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 MANBALQ9NQG1 85 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 CMC2Q9NRP2 79 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 ANK2Q01484 3957 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 PATJQ8NI35 1801 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 TRAV8-2A0A0B4J237 113 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 ZC3H12DA2A288 527 aaKnown RBP3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 C1QL1O75973 258 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 Q499Y3 187 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 BVES-AS1Q5T3Y7 98 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 DCAF12Q5T6F0 453 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 PRELID3AQ96N28 172 aa3.26□□□□□ -1.89
R3HDM1-220ENST00000628915 BCL2L10Q9HD36 194 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms