RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 THOC7Q6I9Y2 204 aaKnown RBP11.51□□□□□ -0.57
PNKP-221ENST00000627317 LYZL2Q7Z4W2 148 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 LRTM2Q8N967 370 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 MINDY2Q8NBR6 621 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 OR5M8Q8NGP6 311 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 OR5B3Q8NH48 314 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 PDCD10Q9BUL8 212 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 COA4Q9NYJ1 87 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 CACNG5Q9UF02 275 aa11.51□□□□□ -0.57
PNKP-221ENST00000627317 A0A0B4J293 547 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 TEX50A0A1B0GTY4 177 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 TCRBV4S1A1TA0A5B7 111 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 TEX22C9J3V5 150 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 WIPF1O43516 503 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 PTTG1O95997 202 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 SULT1A3P0DMM9 295 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 SULT1A4P0DMN0 295 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 ASPHD1Q5U4P2 390 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 TMEM65Q6PI78 240 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 OR5T1Q8NG75 326 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 OR52B4Q8NGK2 314 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 FAM110DQ8TAY7 271 aaPredicted RBP11.5□□□□□ -0.57
PNKP-221ENST00000627317 GPR146Q96CH1 333 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 CITED2Q99967 270 aaPredicted RBP11.5□□□□□ -0.57
PNKP-221ENST00000627317 SRSF8Q9BRL6 282 aaKnown RBP11.5□□□□□ -0.57
PNKP-221ENST00000627317 SEC22CQ9BRL7 303 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 ZNF355PQ9NSJ1 428 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 ZNF257Q9Y2Q1 563 aa11.5□□□□□ -0.57
PNKP-221ENST00000627317 A0A1B0GW64 132 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 DBX1A6NMT0 343 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 E7EUB6 86 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 INMT-MINDY4F8WBC2 141 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 ST8SIA3O43173 380 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 SOX15O60248 233 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 IFNA17P01571 189 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 HOXB5P09067 269 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 MECP2P51608 486 aaKnown RBP11.49□□□□□ -0.57
PNKP-221ENST00000627317 NMSQ5H8A3 153 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 TCTEX1D4Q5JR98 221 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 LCNL1Q6ZST4 164 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 HSD17B13Q7Z5P4 300 aaPredicted RBP11.49□□□□□ -0.57
PNKP-221ENST00000627317 ZNF429Q86V71 674 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 MRPL41Q8IXM3 137 aaKnown RBP11.49□□□□□ -0.57
PNKP-221ENST00000627317 ZNF431Q8TF32 576 aaPredicted RBP11.49□□□□□ -0.57
PNKP-221ENST00000627317 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.49□□□□□ -0.57
PNKP-221ENST00000627317 TMED3Q9Y3Q3 217 aa11.49□□□□□ -0.57
PNKP-221ENST00000627317 TSSC4Q9Y5U2 329 aaPredicted RBP11.49□□□□□ -0.57
PNKP-221ENST00000627317 PRKDCP78527 4128 aaKnown RBP11.48□□□□□ -0.57
PNKP-221ENST00000627317 A0A1W2PRX2 142 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 IGLC7A0M8Q6 106 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 CGB1A6NKQ9 187 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 H3BUA1 57 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 IGLV1-40P01703 118 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 IL5P05113 134 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 RPLP1P05386 114 aaKnown RBP11.48□□□□□ -0.57
PNKP-221ENST00000627317 AREGP15514 252 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 PSMB8P28062 276 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 HSPE1P61604 102 aaKnown RBP11.48□□□□□ -0.57
PNKP-221ENST00000627317 CD83Q01151 205 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 SMCO1Q147U7 214 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 NSUN5P1Q3KNT7 163 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 Q6ZRM9 215 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 NDUFA11Q86Y39 141 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 RNF152Q8N8N0 203 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 OR10W1Q8NGF6 305 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 MITD1Q8WV92 249 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 MS4A10Q96PG2 267 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 PLEKHA3Q9HB20 300 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 GPN1Q9HCN4 374 aaPredicted RBP11.48□□□□□ -0.57
PNKP-221ENST00000627317 NDUFA4L2Q9NRX3 87 aa11.48□□□□□ -0.57
PNKP-221ENST00000627317 TET2Q6N021 2002 aaPredicted RBP11.48□□□□□ -0.57
PNKP-221ENST00000627317 A0A1B0GU03 582 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 NPIPB5A8MRT5 1133 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 NUDT19A8MXV4 375 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 PRAF2O60831 178 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 DHFRP00374 187 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 IFNA21P01568 189 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 TRGV3P03979 118 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 REG1AP05451 166 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 OR13C7P0DN81 318 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 SPNP16150 400 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 PSMB6P28072 239 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 HOXA1P49639 335 aaPredicted RBP11.47□□□□□ -0.57
PNKP-221ENST00000627317 TPPP2P59282 170 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 RPL23AP62750 156 aaKnown RBP11.47□□□□□ -0.57
PNKP-221ENST00000627317 PRCDQ00LT1 54 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 SPINK9Q5DT21 86 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 TTC9CQ8N5M4 171 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 OR1S1Q8NH92 325 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 MARVELD1Q9BSK0 173 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 KLK15Q9H2R5 256 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 SLA2Q9H6Q3 261 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 CACFD1Q9UGQ2 172 aa11.47□□□□□ -0.57
PNKP-221ENST00000627317 ADAP1O75689 374 aa11.46□□□□□ -0.57
PNKP-221ENST00000627317 DEFA4P12838 97 aa11.46□□□□□ -0.57
PNKP-221ENST00000627317 RAB9AP51151 201 aa11.46□□□□□ -0.57
PNKP-221ENST00000627317 RGS21Q2M5E4 152 aa11.46□□□□□ -0.57
PNKP-221ENST00000627317 GGNBP1Q5YKI7 109 aa11.46□□□□□ -0.57
PNKP-221ENST00000627317 C12orf45Q8N5I9 185 aaPredicted RBP11.46□□□□□ -0.57
PNKP-221ENST00000627317 UXS1Q8NBZ7 420 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms