RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 A0A1W2PRX2 142 aa14.93□□□□□ -0.02
SQSTM1-216ENST00000626660 C9orf170A2RU37 121 aa14.93□□□□□ -0.02
SQSTM1-216ENST00000626660 H3BUA1 57 aa14.93□□□□□ -0.02
SQSTM1-216ENST00000626660 SOX15O60248 233 aa14.93□□□□□ -0.02
SQSTM1-216ENST00000626660 LCNL1Q6ZST4 164 aa14.93□□□□□ -0.02
SQSTM1-216ENST00000626660 HSD17B13Q7Z5P4 300 aaPredicted RBP14.93□□□□□ -0.02
SQSTM1-216ENST00000626660 LYG2Q86SG7 212 aa14.93□□□□□ -0.02
SQSTM1-216ENST00000626660 MRPL41Q8IXM3 137 aaKnown RBP14.93□□□□□ -0.02
SQSTM1-216ENST00000626660 PDCD10Q9BUL8 212 aa14.93□□□□□ -0.02
SQSTM1-216ENST00000626660 SLA2Q9H6Q3 261 aa14.93□□□□□ -0.02
SQSTM1-216ENST00000626660 ZNF257Q9Y2Q1 563 aa14.93□□□□□ -0.02
SQSTM1-216ENST00000626660 A0A0G2JRQ6 117 aa14.92□□□□□ -0.02
SQSTM1-216ENST00000626660 NUDT19A8MXV4 375 aa14.92□□□□□ -0.02
SQSTM1-216ENST00000626660 E7EUB6 86 aa14.92□□□□□ -0.02
SQSTM1-216ENST00000626660 RAB9AP51151 201 aa14.92□□□□□ -0.02
SQSTM1-216ENST00000626660 RPL23AP62750 156 aaKnown RBP14.92□□□□□ -0.02
SQSTM1-216ENST00000626660 DHRS2Q13268 280 aa14.92□□□□□ -0.02
SQSTM1-216ENST00000626660 ANKRD55Q3KP44 614 aa14.92□□□□□ -0.02
SQSTM1-216ENST00000626660 TTC9CQ8N5M4 171 aa14.92□□□□□ -0.02
SQSTM1-216ENST00000626660 LRTM2Q8N967 370 aa14.92□□□□□ -0.02
SQSTM1-216ENST00000626660 COQ8AQ8NI60 647 aa14.92□□□□□ -0.02
SQSTM1-216ENST00000626660 MS4A10Q96PG2 267 aa14.92□□□□□ -0.02
SQSTM1-216ENST00000626660 NDUFA4L2Q9NRX3 87 aa14.92□□□□□ -0.02
SQSTM1-216ENST00000626660 WNK1Q9H4A3 2382 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 A0A0B4J293 547 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 A0A1B0GW64 132 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 CGB1A6NKQ9 187 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 NPIPB5A8MRT5 1133 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 DUS4LO95620 317 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 DHFRP00374 187 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 TRGV3P03979 118 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 MECP2P51608 486 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 TPPP2P59282 170 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 HSPE1P61604 102 aaKnown RBP14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 LYZL2Q7Z4W2 148 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 NRARPQ7Z6K4 114 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 ZNF429Q86V71 674 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 GPR146Q96CH1 333 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 KLK15Q9H2R5 256 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 CACNG5Q9UF02 275 aa14.91□□□□□ -0.02
SQSTM1-216ENST00000626660 ANK2Q01484 3957 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 IGLC7A0M8Q6 106 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 DBX1A6NMT0 343 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 IFNA17P01571 189 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 SULT1A3P0DMM9 295 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 SULT1A4P0DMN0 295 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 AREGP15514 252 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 PSMB6P28072 239 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 PLET1Q6UQ28 207 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 KLHL30-AS1Q8NEE0 82 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 DUSP18Q8NEJ0 188 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 PALMDQ9NP74 551 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 CACFD1Q9UGQ2 172 aa14.9□□□□□ -0.02
SQSTM1-216ENST00000626660 ADARB2-AS1A8MUL3 147 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 ST8SIA3O43173 380 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 BRI3O95415 125 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 REG1AP05451 166 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 OR13C7P0DN81 318 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 CDX1P47902 265 aaPredicted RBP14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 PRCDQ00LT1 54 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 NMSQ5H8A3 153 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 Q6ZRM9 215 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 ZNF491Q8N8L2 437 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 OR4F17Q8NGA8 305 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 OR10W1Q8NGF6 305 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 MYOZ3Q8TDC0 251 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 UBE2E2Q96LR5 201 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 OR4F4Q96R69 305 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 PLEKHA3Q9HB20 300 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 TMED3Q9Y3Q3 217 aa14.89□□□□□ -0.03
SQSTM1-216ENST00000626660 CYB5BO43169 146 aa14.88□□□□□ -0.03
SQSTM1-216ENST00000626660 CRYGCP07315 174 aa14.88□□□□□ -0.03
SQSTM1-216ENST00000626660 DEFA4P12838 97 aa14.88□□□□□ -0.03
SQSTM1-216ENST00000626660 CTRB1P17538 263 aa14.88□□□□□ -0.03
SQSTM1-216ENST00000626660 SMCO1Q147U7 214 aa14.88□□□□□ -0.03
SQSTM1-216ENST00000626660 CTRB2Q6GPI1 263 aa14.88□□□□□ -0.03
SQSTM1-216ENST00000626660 ENY2Q9NPA8 101 aa14.88□□□□□ -0.03
SQSTM1-216ENST00000626660 A0A0G2JLM5 398 aa14.87□□□□□ -0.03
SQSTM1-216ENST00000626660 A0A1B0GU03 582 aa14.87□□□□□ -0.03
SQSTM1-216ENST00000626660 C13orf42A0A1B0GVH6 325 aa14.87□□□□□ -0.03
SQSTM1-216ENST00000626660 IFNA21P01568 189 aa14.87□□□□□ -0.03
SQSTM1-216ENST00000626660 HOXB5P09067 269 aa14.87□□□□□ -0.03
SQSTM1-216ENST00000626660 HIST1H1BP16401 226 aaKnown RBP14.87□□□□□ -0.03
SQSTM1-216ENST00000626660 OR52B4Q8NGK2 314 aa14.87□□□□□ -0.03
SQSTM1-216ENST00000626660 OR1S1Q8NH92 325 aa14.87□□□□□ -0.03
SQSTM1-216ENST00000626660 C4orf3Q8WVX3 66 aa14.87□□□□□ -0.03
SQSTM1-216ENST00000626660 SEC22CQ9BRL7 303 aa14.87□□□□□ -0.03
SQSTM1-216ENST00000626660 FAM223BA6NKX1 122 aa14.86□□□□□ -0.03
SQSTM1-216ENST00000626660 INMT-MINDY4F8WBC2 141 aa14.86□□□□□ -0.03
SQSTM1-216ENST00000626660 PRH1P02810 166 aa14.86□□□□□ -0.03
SQSTM1-216ENST00000626660 IL5P05113 134 aa14.86□□□□□ -0.03
SQSTM1-216ENST00000626660 HOXA1P49639 335 aaPredicted RBP14.86□□□□□ -0.03
SQSTM1-216ENST00000626660 SPCS3P61009 180 aa14.86□□□□□ -0.03
SQSTM1-216ENST00000626660 ERHP84090 104 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-216ENST00000626660 RHOGP84095 191 aa14.86□□□□□ -0.03
SQSTM1-216ENST00000626660 WT1-ASQ06250 92 aa14.86□□□□□ -0.03
SQSTM1-216ENST00000626660 DCTN2Q13561 401 aaKnown RBP14.86□□□□□ -0.03
SQSTM1-216ENST00000626660 KIAA0141Q14154 515 aaPredicted RBP14.86□□□□□ -0.03
SQSTM1-216ENST00000626660 AARDQ4LEZ3 155 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms