RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 PERPQ96FX8 193 aa11.02□□□□□ -0.65
SIRPA-204ENST00000622179 FGF23Q9GZV9 251 aaPredicted RBP11.02□□□□□ -0.65
SIRPA-204ENST00000622179 AAMDCQ9H7C9 122 aa11.02□□□□□ -0.65
SIRPA-204ENST00000622179 RNF115Q9Y4L5 304 aa11.02□□□□□ -0.65
SIRPA-204ENST00000622179 PPIAL4CA0A0B4J2A2 164 aa11.02□□□□□ -0.65
SIRPA-204ENST00000622179 A0A1W2PNU3 283 aaPredicted RBP11.02□□□□□ -0.65
SIRPA-204ENST00000622179 C10orf142B7Z368 130 aa11.02□□□□□ -0.65
SIRPA-204ENST00000622179 PPIAL4GP0DN37 164 aa11.02□□□□□ -0.65
SIRPA-204ENST00000622179 DNAJC4Q9NNZ3 241 aa11.02□□□□□ -0.65
SIRPA-204ENST00000622179 PPP1R14DQ9NXH3 145 aa11.02□□□□□ -0.65
SIRPA-204ENST00000622179 COA4Q9NYJ1 87 aa11.02□□□□□ -0.65
SIRPA-204ENST00000622179 ELOVL5Q9NYP7 299 aa11.02□□□□□ -0.65
SIRPA-204ENST00000622179 ARL3P36405 182 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 MBNL2Q5VZF2 373 aaKnown RBP11.01□□□□□ -0.65
SIRPA-204ENST00000622179 TUBA4BQ9H853 241 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 TNFRSF19Q9NS68 423 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.01□□□□□ -0.654e-8■■■■■ 36.7
SIRPA-204ENST00000622179 IGKV1D-17A0A075B6S4 117 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 A0A087X0M5 115 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 TRAV3A0A0B4J244 114 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 A0A1B0GX30 115 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 LYNX1G3V0Z9 82 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 LYNX1P0DP58 116 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 TMUB1Q9BVT8 246 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 CREBBPQ92793 2442 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 PGPEP1LA6NFU8 196 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 ZNF785A8K8V0 405 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 HYPMO75409 117 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 CLEC3BP05452 202 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 C8orf88P0DMB2 117 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 RPL29P47914 159 aaKnown RBP11.01□□□□□ -0.65
SIRPA-204ENST00000622179 MMD2Q8IY49 270 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 ZNF596Q8TC21 504 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 TMEM186Q96B77 213 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 TXNDC17Q9BRA2 123 aa11.01□□□□□ -0.65
SIRPA-204ENST00000622179 SCO2A0A1W2PP80 73 aa11□□□□□ -0.65
SIRPA-204ENST00000622179 SRP14P37108 136 aaKnown RBP11□□□□□ -0.65
SIRPA-204ENST00000622179 HLA-DRB5Q30154 266 aa11□□□□□ -0.65
SIRPA-204ENST00000622179 Q6ZR03 302 aa11□□□□□ -0.65
SIRPA-204ENST00000622179 TRBV23-1A0A0A0MS06 115 aa11□□□□□ -0.65
SIRPA-204ENST00000622179 SLC31A2O15432 143 aa11□□□□□ -0.65
SIRPA-204ENST00000622179 MOSP00540 346 aa11□□□□□ -0.65
SIRPA-204ENST00000622179 NUBP1P53384 320 aa11□□□□□ -0.65
SIRPA-204ENST00000622179 RPL23P62829 140 aaKnown RBP11□□□□□ -0.65
SIRPA-204ENST00000622179 DOLPP1Q86YN1 238 aa11□□□□□ -0.65
SIRPA-204ENST00000622179 OR2D3Q8NGH3 330 aa11□□□□□ -0.65
SIRPA-204ENST00000622179 VAMP8Q9BV40 100 aa11□□□□□ -0.65
SIRPA-204ENST00000622179 ZNF430Q9H8G1 570 aaPredicted RBP11□□□□□ -0.65
SIRPA-204ENST00000622179 HIST1H1BP16401 226 aaKnown RBP11□□□□□ -0.65
SIRPA-204ENST00000622179 MFAP2P55001 183 aa11□□□□□ -0.65
SIRPA-204ENST00000622179 WDR73Q6P4I2 378 aa11□□□□□ -0.65
SIRPA-204ENST00000622179 NOL4LQ96MY1 436 aaPredicted RBP11□□□□□ -0.65
SIRPA-204ENST00000622179 MBNL3Q9NUK0 354 aaKnown RBP11□□□□□ -0.65
SIRPA-204ENST00000622179 PGPA6NDG6 321 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 NDUFA2O43678 99 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 SAA1P0DJI8 122 aaPredicted RBP10.99□□□□□ -0.65
SIRPA-204ENST00000622179 ELOBQ15370 118 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 SSX8Q7RTT4 187 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 OR1P1Q8NH06 330 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 MBD3L1Q8WWY6 194 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 SFRP2Q96HF1 295 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 THYN1Q9P016 225 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 RALYQ9UKM9 306 aaKnown RBP10.99□□□□□ -0.65
SIRPA-204ENST00000622179 SLC17A3O00476 420 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 TM4SF5O14894 197 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 COL8A1P27658 744 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 PAX9P55771 341 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 KIAA1644Q3SXP7 199 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 IBA57Q5T440 356 aaKnown RBP10.99□□□□□ -0.65
SIRPA-204ENST00000622179 TMEM14EPQ6UXP3 125 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 MIR17HGQ75NE6 70 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 PNKDQ8N490 385 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 LINC00312Q9Y6C7 94 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 A0A087WWC5 75 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 GRIFINA4D1Z8 144 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 IGKV1-39P01597 117 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 IGKV1D-39P04432 117 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 MYOD1P15172 320 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 APOBEC3AP31941 199 aaPredicted RBP10.99□□□□□ -0.65
SIRPA-204ENST00000622179 OSR1Q8TAX0 266 aaPredicted RBP10.99□□□□□ -0.65
SIRPA-204ENST00000622179 GGACTQ9BVM4 153 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 PRRC2CQ9Y520 2896 aaKnown RBP10.99□□□□□ -0.65
SIRPA-204ENST00000622179 CXCL1P09341 107 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 TMPRSS3P57727 454 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 SMIM15Q7Z3B0 74 aa10.99□□□□□ -0.65
SIRPA-204ENST00000622179 C15orf61A6NNL5 157 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 P01737 135 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 CSN3P07498 182 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 TIMP3P35625 211 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 GPR6P46095 362 aaPredicted RBP10.98□□□□□ -0.65
SIRPA-204ENST00000622179 ERVFRD-1P60508 538 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 SELENOTP62341 195 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 SPSB3Q6PJ21 355 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.98□□□□□ -0.65
SIRPA-204ENST00000622179 STXBP6Q8NFX7 210 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 WDR83OSQ9Y284 106 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 ARL2-SNX15V9GYD0 113 aa10.98□□□□□ -0.65
SIRPA-204ENST00000622179 MBD3L4A6NDZ8 208 aaPredicted RBP10.98□□□□□ -0.65
SIRPA-204ENST00000622179 MBD3L3A6NE82 208 aaPredicted RBP10.98□□□□□ -0.65
SIRPA-204ENST00000622179 MBD3L5A6NJ08 208 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms