RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	ZNF596	Q8TC21	504 aa		11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	BCL2L2	Q92843	193 aa	Predicted RBP	11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	GPR179	Q6PRD1	2367 aa		11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	CER1	O95813	267 aa		11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	PSG1	P11464	419 aa		11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	CLCF1	Q9UBD9	225 aa		11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	NCOR1	O75376	2440 aa		11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	LYZL6	O75951	148 aa		11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	OR9G9	P0C7N8	305 aa		11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	GPR12	P47775	334 aa		11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	ZNF718	Q3SXZ3	478 aa		11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	ZC2HC1A	Q96GY0	325 aa		11.92	□□□□□ -0.5
SYNRG-231	ENST00000622045	IGLL1	P15814	213 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	ARG2	P78540	354 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	GGTLC1	Q9BX51	225 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	FZR1	Q9UM11	496 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	IGHV2-70D	A0A0C4DH43	119 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	SPINT2	O43291	252 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	HSBP1	O75506	76 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	ERVK-16	P61578	105 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	VWC2	Q2TAL6	325 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	RNASEK	Q6P5S7	137 aa	Known RBP	11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	DCTN5	Q9BTE1	182 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	HINT2	Q9BX68	163 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	CDC42EP3	Q9UKI2	254 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	HELT	A6NFD8	242 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	SMPD2	O60906	423 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	GPR6	P46095	362 aa	Predicted RBP	11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	TNXA	Q16473	311 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	ZNF439	Q8NDP4	499 aa		11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	HSD17B10	Q99714	261 aa	Known RBP	11.91	□□□□□ -0.5
SYNRG-231	ENST00000622045	APCS	P02743	223 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	MEOX1	P50221	254 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	MPV17L2	Q567V2	206 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	GCNT2	Q8N0V5	402 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	WASHC3	Q9Y3C0	194 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	YLPM1	P49750	1951 aa	Known RBP	11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045		M0R2Z0	102 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045		P0C879	139 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	USF1	P22415	310 aa	Predicted RBP	11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	FABP6	P51161	128 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	BPIFB3	P59826	476 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	SLC35E4	Q6ICL7	350 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	OR4A47	Q6IF82	309 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	KIR3DL3	Q8N743	410 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	OR13A1	Q8NGR1	328 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	RAB1C	Q92928	201 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	GP6	Q9HCN6	339 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	CLEC5A	Q9NY25	188 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	ICE1	Q9Y2F5	2266 aa		11.9	□□□□□ -0.5
SYNRG-231	ENST00000622045	IGHV2-26	A0A0B4J1V2	119 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045		M0R1X1	148 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	CX3CL1	P78423	397 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	SLA	Q13239	276 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	PSG5	Q15238	335 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	PMCHL1	Q16048	86 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	WDR73	Q6P4I2	378 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	MRPS16	Q9Y3D3	137 aa	Known RBP	11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	MED13	Q9UHV7	2174 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	TIMM8A	O60220	97 aa	Predicted RBP	11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	OR10J3	Q5JRS4	329 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	EBLN2	Q6P2I7	272 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	MIR17HG	Q75NE6	70 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	SLC24A4	Q8NFF2	622 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	FAM122A	Q96E09	287 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	TRAV9-1	A0A075B6T8	112 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	IGLC7	A0M8Q6	106 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	OR2T8	A6NH00	312 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	SH2D7	A6NKC9	451 aa	Predicted RBP	11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	OPRK1	P41145	380 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	EFNB3	Q15768	340 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	TMEM105	Q8N8V8	129 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	NEUROG1	Q92886	237 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	COQ2	Q96H96	371 aa		11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.89	□□□□□ -0.51
SYNRG-231	ENST00000622045	KLRC4-KLRK1	H3BQV0	150 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	OR10J4	P0C629	311 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	FOXF2	Q12947	444 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	TIGIT	Q495A1	244 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	KLF14	Q8TD94	323 aa	Predicted RBP	11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	ARL2-SNX15	V9GYD0	113 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	TRAV3	A0A0B4J244	114 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	HOXC12	P31275	282 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	MPV17	P39210	176 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	FAM216A	Q8WUB2	273 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	CST9L	Q9H4G1	147 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	METRN	Q9UJH8	293 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	RP1L1	Q8IWN7	2480 aa	Predicted RBP	11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	TRAV9-2	A0A087WT02	112 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	TRBV9	A0A0B4J1U6	114 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	IGHV1-69-2	A0A0G2JMI3	117 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	AMY1A	P04745	511 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	RPL19	P84098	196 aa	Known RBP	11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	STPG3	Q8N7X2	389 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	FAM168A	Q92567	244 aa		11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.88	□□□□□ -0.51
SYNRG-231	ENST00000622045		A0A1W2PN81	502 aa		11.87	□□□□□ -0.51

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