RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 C1QL1O75973 258 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 NUDT3O95989 172 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 SLC25A16P16260 332 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 CCL3L1P16619 93 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 ADIPOQQ15848 244 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 C21orf62-AS1Q17RA5 79 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 MRPL20Q9BYC9 149 aaKnown RBP8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 COL11A1P12107 1806 aaPredicted RBP8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 A0A0G2JK05 382 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 PSMB11A5LHX3 300 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 OR4C46A6NHA9 309 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 PPP1R17O96001 155 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 TAF15Q92804 592 aaKnown RBP eCLIP8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 TBX15Q96SF7 602 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 ATG101Q9BSB4 218 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 REPIN1Q9BWE0 567 aaKnown RBP8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 MRPL32Q9BYC8 188 aaKnown RBP8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 TMEM133Q9H2Q1 129 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 TUBD1Q9UJT1 453 aa8.25□□□□□ -1.09
CLTCL1-211ENST00000621271 PRSS2P07478 247 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 TMEM177Q53S58 311 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 DPH3P1Q9H4G8 78 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 CCDC88CQ9P219 2028 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 PLXNA1Q9UIW2 1896 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 NPIPB9F8W1W9 429 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 SAP30O75446 220 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 CIRBPQ14011 172 aaKnown RBP8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 MEIG1Q5JSS6 88 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 RPRMQ9NS64 109 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 CDC42EP3Q9UKI2 254 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 SIPA1L1O43166 1804 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 IGHV1-18A0A0C4DH31 117 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 MSGN1A6NI15 193 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 PET117Q6UWS5 81 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 ZNF818PQ6ZRF7 136 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 GOLT1AQ6ZVE7 132 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 GATAD1Q8WUU5 269 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 SRSF12Q8WXF0 261 aaKnown RBP8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 PAM16Q9Y3D7 125 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 SPTBN1Q01082 2364 aaKnown RBP8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 CD33P20138 364 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 CA7P43166 264 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 SUMO2P61956 95 aaKnown RBP8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 FOXF2Q12947 444 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 CKAP5Q14008 2032 aa8.24□□□□□ -1.09
CLTCL1-211ENST00000621271 NDUFB4O95168 129 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 COL5A1-AS1Q5SY13 56 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 LINC01590Q5TEZ4 76 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 MRAP2Q96G30 205 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 NABP2Q9BQ15 211 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 GGACTQ9BVM4 153 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 K7ENP7 123 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 CA2P00918 260 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 LINC00305Q7Z4B0 112 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 CRIPAKQ8N1N5 446 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 COPS9Q8WXC6 57 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 MAP1LC3AQ9H492 121 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 MYO16Q9Y6X6 1858 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 PINLYPA6NC86 204 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 ASIPP42127 132 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 TMEM167AQ8TBQ9 72 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 GPR61Q9BZJ8 451 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 RNF114Q9Y508 228 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 IGHV3OR16-8A0A075B7F1 116 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 DANCRP0C864 163 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 KLK2P20151 261 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 HINT1P49773 126 aaPredicted RBP8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 PRB3Q04118 309 aaPredicted RBP8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 ATRAIDQ6UW56 229 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 OR1P1Q8NH06 330 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 VN1R17PQ8TDU5 208 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 COL25A1Q9BXS0 654 aaPredicted RBP8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 C5orf66Q9H5L9 145 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 CACNA1IQ9P0X4 2223 aa8.23□□□□□ -1.09
CLTCL1-211ENST00000621271 MDKP21741 143 aaPredicted RBP8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 BTCP35070 178 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 CMC4P56277 68 aaPredicted RBP8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 C3orf36Q3SXR2 165 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 ZNF837Q96EG3 531 aaPredicted RBP8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 SNRNP200O75643 2136 aaKnown RBP8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 TET1Q8NFU7 2136 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 TAS2R60P59551 318 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 SGMS2Q8NHU3 365 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 WNT10AQ9GZT5 417 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 IFI27L2Q9H2X8 130 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 PLSCR4Q9NRQ2 329 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 ZFP30Q9Y2G7 519 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 ICAM4Q14773 271 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 Q6ZS92 163 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 CYP2G1PQ6ZSU1 146 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 TCF24Q7RTU0 167 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 RAB37Q96AX2 223 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 GSN-AS1Q9NRJ2 163 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 TGIF2-C20orf24A0A0A6YYL0 155 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 NPIPB7O75200 414 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 RNASE1P07998 156 aaKnown RBP8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 CD24P25063 80 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 MBNL2Q5VZF2 373 aaKnown RBP8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 NEU1Q99519 415 aa8.22□□□□□ -1.09
CLTCL1-211ENST00000621271 SPTAN1Q13813 2472 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms