RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 TEX45Q8NA69 505 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 OR5AN1Q8NGI8 311 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 FGFBP3Q8TAT2 258 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 TRAV8-7A0A075B6U6 113 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 IGKV1D-43A0A0B4J1Z2 117 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 SELLP14151 372 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 OR10J3Q5JRS4 329 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 IGHV2-5P01817 119 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 SMIM7Q9BQ49 75 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 TOLLIPQ9H0E2 274 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 GREB1Q4ZG55 1949 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 WNK2Q9Y3S1 2297 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 C1QL4Q86Z23 238 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 A0A1W2PP11 408 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 BUB1B-PAK6H3BSN5 160 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 KIAA0141Q14154 515 aaPredicted RBP9.03□□□□□ -0.96
POLR2A-209ENST00000617998 FAM162BQ5T6X4 162 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 ASCL2Q99929 193 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 RNF167Q9H6Y7 350 aa9.03□□□□□ -0.96
POLR2A-209ENST00000617998 SAA2-SAA4A0A096LPE2 208 aa9.02□□□□□ -0.96
POLR2A-209ENST00000617998 FAM223BA6NKX1 122 aa9.02□□□□□ -0.96
POLR2A-209ENST00000617998 SAA2P0DJI9 122 aaPredicted RBP9.02□□□□□ -0.96
POLR2A-209ENST00000617998 HERPUD1Q15011 391 aa9.02□□□□□ -0.96
POLR2A-209ENST00000617998 FDX2Q6P4F2 183 aa9.02□□□□□ -0.96
POLR2A-209ENST00000617998 FAM223AQ8IWN6 122 aa9.02□□□□□ -0.96
POLR2A-209ENST00000617998 TMEM50BP56557 158 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 NECAP1Q8NC96 275 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 GPR82Q96P67 336 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 CHD8Q9HCK8 2581 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 CA1P00915 261 aaPredicted RBP9.02□□□□□ -0.97
POLR2A-209ENST00000617998 RPL35P42766 123 aaKnown RBP9.02□□□□□ -0.97
POLR2A-209ENST00000617998 TMEM187Q14656 261 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 VWA8A3KMH1 1905 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 RIGQ13278 110 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 HOGA1Q86XE5 327 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 FGFRL1Q8N441 504 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 Q8NA96 180 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 TRAV8-6A0A0B4J262 113 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 LOXL1Q08397 574 aaPredicted RBP9.02□□□□□ -0.97
POLR2A-209ENST00000617998 INSL4Q14641 139 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 SDF2L1Q9HCN8 221 aa9.02□□□□□ -0.97
POLR2A-209ENST00000617998 SMIM4Q8WVI0 70 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 NKX6-2Q9C056 277 aaPredicted RBP9.01□□□□□ -0.97
POLR2A-209ENST00000617998 LIME1Q9H400 295 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 GBF1Q92538 1859 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 GALP22466 123 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 TWIST1Q15672 202 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 C5orf64Q2M2E5 130 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 MLNRO43193 412 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 MOGAT2Q3SYC2 334 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 SPSB3Q6PJ21 355 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 PRSS3P2Q8NHM4 247 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 C19orf24Q9BVV8 132 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 SONP18583 2426 aaKnown RBP9.01□□□□□ -0.97
POLR2A-209ENST00000617998 TRBV7-1A0A0A6YYK4 115 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 C19orf84I3L1E1 186 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 YPEL1O60688 119 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 GCSHP23434 173 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 TDGF1P3P51864 188 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 CFAP161Q6P656 301 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 YPEL2Q96QA6 119 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 ZNF436Q9C0F3 470 aaPredicted RBP9.01□□□□□ -0.97
POLR2A-209ENST00000617998 AKIP1Q9NQ31 210 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 MTFP1Q9UDX5 166 aa9.01□□□□□ -0.97
POLR2A-209ENST00000617998 ZNF688P0C7X2 276 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 PMCHP20382 165 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 NKX2-5P52952 324 aaPredicted RBP9□□□□□ -0.97
POLR2A-209ENST00000617998 PQLC2LA1A4F0 135 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 SHISA9B4DS77 424 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 ELANEP08246 267 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 GP9P14770 177 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 PAX1P15863 534 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 HINT1P49773 126 aaPredicted RBP9□□□□□ -0.97
POLR2A-209ENST00000617998 WFDC12Q8WWY7 111 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 GAFA1Q96PS6 74 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 MAP1LC3B2A6NCE7 125 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 DYNLT3P51808 116 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 CIARTQ8N365 385 aaPredicted RBP9□□□□□ -0.97
POLR2A-209ENST00000617998 PTX4Q96A99 478 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 MAP1LC3BQ9GZQ8 125 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 HSF4Q9ULV5 492 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 EFNA2O43921 213 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 HSPB1P04792 205 aaKnown RBP9□□□□□ -0.97
POLR2A-209ENST00000617998 LOC102723971A0A1B0GUV8 181 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 PGLYRP1O75594 196 aaPredicted RBP9□□□□□ -0.97
POLR2A-209ENST00000617998 FSTP19883 344 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 DNAJC4Q9NNZ3 241 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 HSPB7Q9UBY9 170 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 FLVCR2Q9UPI3 526 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 ATRXP46100 2492 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 SAA1P0DJI8 122 aaPredicted RBP9□□□□□ -0.97
POLR2A-209ENST00000617998 DLX1P56177 255 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 ATP5IP56385 69 aaPredicted RBP9□□□□□ -0.97
POLR2A-209ENST00000617998 RNF5Q99942 180 aa9□□□□□ -0.97
POLR2A-209ENST00000617998 LHBP01229 141 aa8.99□□□□□ -0.97
POLR2A-209ENST00000617998 RCHY1Q96PM5 261 aa8.99□□□□□ -0.97
POLR2A-209ENST00000617998 DUXBA0A1W2PPF3 345 aa8.99□□□□□ -0.97
POLR2A-209ENST00000617998 INSP01308 110 aa8.99□□□□□ -0.97
POLR2A-209ENST00000617998 NANOS3P60323 173 aaKnown RBP8.99□□□□□ -0.97
POLR2A-209ENST00000617998 ASAH1Q13510 395 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms