RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 GDPD1Q8N9F7 314 aa15.47■□□□□ 0.07
TRAPPC3-208ENST00000616074 CD300LFQ8TDQ1 290 aa15.47■□□□□ 0.07
TRAPPC3-208ENST00000616074 VN1R17PQ8TDU5 208 aa15.47■□□□□ 0.07
TRAPPC3-208ENST00000616074 TMEM190Q8WZ59 177 aa15.47■□□□□ 0.07
TRAPPC3-208ENST00000616074 YTHDF1Q9BYJ9 559 aaKnown RBP15.47■□□□□ 0.07
TRAPPC3-208ENST00000616074 COMMD9Q9P000 198 aa15.47■□□□□ 0.07
TRAPPC3-208ENST00000616074 TEX50A0A1B0GTY4 177 aa15.46■□□□□ 0.07
TRAPPC3-208ENST00000616074 OR2T8A6NH00 312 aa15.46■□□□□ 0.07
TRAPPC3-208ENST00000616074 OR13C7P0DN81 318 aa15.46■□□□□ 0.07
TRAPPC3-208ENST00000616074 GNRHRP30968 328 aa15.46■□□□□ 0.07
TRAPPC3-208ENST00000616074 CBX5P45973 191 aa15.46■□□□□ 0.07
TRAPPC3-208ENST00000616074 C5orf66Q9H5L9 145 aa15.46■□□□□ 0.07
TRAPPC3-208ENST00000616074 UBQLN2Q9UHD9 624 aa15.46■□□□□ 0.07
TRAPPC3-208ENST00000616074 MARCH11A6NNE9 402 aa15.45■□□□□ 0.06
TRAPPC3-208ENST00000616074 SERPINE2P07093 398 aa15.45■□□□□ 0.06
TRAPPC3-208ENST00000616074 TRAPPC2P0DI81 140 aa15.45■□□□□ 0.06
TRAPPC3-208ENST00000616074 TRAPPC2BP0DI82 140 aa15.45■□□□□ 0.06
TRAPPC3-208ENST00000616074 HERV-K104P61576 105 aa15.45■□□□□ 0.06
TRAPPC3-208ENST00000616074 THOC7Q6I9Y2 204 aaKnown RBP15.45■□□□□ 0.06
TRAPPC3-208ENST00000616074 LINC00476Q8WZB0 136 aa15.45■□□□□ 0.06
TRAPPC3-208ENST00000616074 SPAG8Q99932 426 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC3-208ENST00000616074 Q9H521 79 aa15.45■□□□□ 0.06
TRAPPC3-208ENST00000616074 EHFQ9NZC4 300 aa15.45■□□□□ 0.06
TRAPPC3-208ENST00000616074 IGHV3-21A0A0B4J1V1 117 aa15.44■□□□□ 0.06
TRAPPC3-208ENST00000616074 ATP6V1G2O95670 118 aa15.44■□□□□ 0.06
TRAPPC3-208ENST00000616074 RLN1P04808 185 aa15.44■□□□□ 0.06
TRAPPC3-208ENST00000616074 MFAP2P55001 183 aa15.44■□□□□ 0.06
TRAPPC3-208ENST00000616074 ERVK-16P61578 105 aa15.44■□□□□ 0.06
TRAPPC3-208ENST00000616074 EWSR1Q01844 656 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRAPPC3-208ENST00000616074 PMS2P11Q13670 270 aa15.44■□□□□ 0.06
TRAPPC3-208ENST00000616074 SLC25A24Q6NUK1 477 aa15.44■□□□□ 0.06
TRAPPC3-208ENST00000616074 HSD17B13Q7Z5P4 300 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC3-208ENST00000616074 SLC38A6Q8IZM9 456 aa15.44■□□□□ 0.06
TRAPPC3-208ENST00000616074 IFT46Q9NQC8 304 aa15.44■□□□□ 0.06
TRAPPC3-208ENST00000616074 A0A0J9YWU9 116 aa15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 TSPAN4O14817 238 aa15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 CYB5BO43169 146 aa15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 NEDD8Q15843 81 aa15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 WFDC3Q8IUB2 231 aa15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 OR1L8Q8NGR8 309 aa15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 BORCS5Q969J3 196 aa15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 MOB3AQ96BX8 217 aa15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 BSCL2Q96G97 398 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 ZNF2Q9BSG1 426 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 HINT2Q9BX68 163 aa15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 DAZ1Q9NQZ3 744 aaKnown RBP15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 NDUFA4L2Q9NRX3 87 aa15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 NSG2Q9Y328 171 aa15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 F11RQ9Y624 299 aaKnown RBP15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 FRAS1Q86XX4 4008 aa15.43■□□□□ 0.06
TRAPPC3-208ENST00000616074 CXorf65A6NEN9 183 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 F8W735 103 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 XRCC3O43542 346 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 PGLYRP1O75594 196 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 F2RP25116 425 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 TGFBR1P36897 503 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 RFX2P48378 723 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 APOC4P55056 127 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 DEFB135Q30KP9 77 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 ODF3L2Q3SX64 289 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 DHRS11Q6UWP2 260 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 SCARB1Q8WTV0 552 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 FCAMRQ8WWV6 532 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 LSM10Q969L4 123 aaKnown RBP15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 CHRDL1Q9BU40 450 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 C21orf62Q9NYP8 219 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 ANAPC10Q9UM13 185 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 TP53TG1Q9Y2A0 90 aa15.42■□□□□ 0.06
TRAPPC3-208ENST00000616074 KMT2AQ03164 3969 aa15.41■□□□□ 0.06
TRAPPC3-208ENST00000616074 IGHV3OR16-8A0A075B7F1 116 aa15.41■□□□□ 0.06
TRAPPC3-208ENST00000616074 NDUFA4O00483 81 aa15.41■□□□□ 0.06
TRAPPC3-208ENST00000616074 SPRY2O43597 315 aa15.41■□□□□ 0.06
TRAPPC3-208ENST00000616074 PMP2P02689 132 aa15.41■□□□□ 0.06
TRAPPC3-208ENST00000616074 LPAR6P43657 344 aa15.41■□□□□ 0.06
TRAPPC3-208ENST00000616074 Q6ZWC4 215 aa15.41■□□□□ 0.06
TRAPPC3-208ENST00000616074 LYG2Q86SG7 212 aa15.41■□□□□ 0.06
TRAPPC3-208ENST00000616074 C20orf24Q9BUV8 137 aa15.41■□□□□ 0.06
TRAPPC3-208ENST00000616074 FXYD6Q9H0Q3 95 aa15.41■□□□□ 0.06
TRAPPC3-208ENST00000616074 OR51B2Q9Y5P1 312 aa15.41■□□□□ 0.06
TRAPPC3-208ENST00000616074 K7EIM0 57 aa15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 ZNF207O43670 478 aaKnown RBP15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 TMEM127O75204 238 aa15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 KRASP01116 189 aa15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 BMI1P35226 326 aa15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 ADMP35318 185 aa15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 G6PCP35575 357 aa15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 TNFRSF9Q07011 255 aa15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 LAMTOR1Q6IAA8 161 aa15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 SPSB3Q6PJ21 355 aa15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 UBAC2Q8NBM4 344 aa15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 DGCR14Q96DF8 476 aaKnown RBP15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 S100A16Q96FQ6 103 aaKnown RBP15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 ATP6V0BQ99437 205 aa15.4■□□□□ 0.06
TRAPPC3-208ENST00000616074 LY6G6CO95867 125 aa15.39■□□□□ 0.05
TRAPPC3-208ENST00000616074 TAS2R20P59543 309 aa15.39■□□□□ 0.05
TRAPPC3-208ENST00000616074 UBE2NLQ5JXB2 153 aa15.39■□□□□ 0.05
TRAPPC3-208ENST00000616074 NUPR2A6NF83 97 aa15.38■□□□□ 0.05
TRAPPC3-208ENST00000616074 DBX1A6NMT0 343 aa15.38■□□□□ 0.05
TRAPPC3-208ENST00000616074 UBE2CO00762 179 aa15.38■□□□□ 0.05
TRAPPC3-208ENST00000616074 SNAPC5O75971 98 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms