RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 TRUB1Q8WWH5 349 aaKnown RBP4.75□□□□□ -1.65
MUC1-227ENST00000615517 GGHQ92820 318 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 MRPL48Q96GC5 212 aaKnown RBP4.75□□□□□ -1.65
MUC1-227ENST00000615517 ATP6V0BQ99437 205 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 CABLES2Q9BTV7 478 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 TMEM59Q9BXS4 323 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 THYN1Q9P016 225 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 RABAC1Q9UI14 185 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 MGAT4AQ9UM21 535 aa4.75□□□□□ -1.65
MUC1-227ENST00000615517 TRAV3A0A0B4J244 114 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 TEX48A0A1B0GUV7 120 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 TCRBV3S1A0A5B6 114 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 SMIM9A6NGZ8 99 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 G3V2T6 193 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 K7EIM0 57 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 FABP7O15540 132 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 YIF1AO95070 293 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 IFNA5P01569 189 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 IGLV2-14P01704 120 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 DNAH10OSP0CZ25 163 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 SERPINB10P48595 397 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 CCL18P55774 89 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 TMEM50BP56557 158 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 LINC00315P59091 139 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 RPL11P62913 178 aaKnown RBP4.74□□□□□ -1.65
MUC1-227ENST00000615517 USF2Q15853 346 aaPredicted RBP4.74□□□□□ -1.65
MUC1-227ENST00000615517 ATP6AP1Q15904 470 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 Q499Y3 187 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 CCDC58Q4VC31 144 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 Q56UQ5 140 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 TTC32Q5I0X7 151 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 SLC25A24Q6NUK1 477 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 SSX7Q7RTT5 188 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 CBR4Q8N4T8 237 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 OR4A4PQ8NGN8 299 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 OR10J5Q8NHC4 309 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 VSTM2AQ8TAG5 236 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 DEFB104AQ8WTQ1 72 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 SMIM19Q96E16 107 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 GRAMD2BQ96HH9 432 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 RAB40CQ96S21 281 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 UQCC2Q9BRT2 126 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 AMBNQ9NP70 447 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 C12orf4Q9NQ89 552 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 ZNF586Q9NXT0 402 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 CKLFQ9UBR5 152 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 GHRLQ9UBU3 117 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 YTHDF2Q9Y5A9 579 aaKnown RBP4.74□□□□□ -1.65
MUC1-227ENST00000615517 RFNGQ9Y644 331 aa4.74□□□□□ -1.65
MUC1-227ENST00000615517 A0A1W2PPQ1 181 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 TMEM14DPA8MWL7 114 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 J3QRK9 145 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 CD5P06127 495 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 SERPINE2P07093 398 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 HOXB6P17509 224 aaKnown RBP4.73□□□□□ -1.65
MUC1-227ENST00000615517 GABRB1P18505 474 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 GCSHP23434 173 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 DAD1P61803 113 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 RELQ04864 619 aaPredicted RBP4.73□□□□□ -1.65
MUC1-227ENST00000615517 WT1-ASQ06250 92 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 EIF4EBP1Q13541 118 aaPredicted RBP4.73□□□□□ -1.65
MUC1-227ENST00000615517 MEDAGQ5VYS4 303 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 GSG1LQ6UXU4 331 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 KCTD9Q7L273 389 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 SPATA24Q86W54 205 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 H1FOOQ8IZA3 346 aaPredicted RBP4.73□□□□□ -1.65
MUC1-227ENST00000615517 GDPD1Q8N9F7 314 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 OR52I1Q8NGK6 324 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 DCANP1Q8TF63 244 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 RNF141Q8WVD5 230 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 PGLYRP3Q96LB9 341 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 MYCBPQ99417 103 aaPredicted RBP4.73□□□□□ -1.65
MUC1-227ENST00000615517 CMSS1Q9BQ75 279 aaKnown RBP4.73□□□□□ -1.65
MUC1-227ENST00000615517 C1QTNF4Q9BXJ3 329 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 NXF2Q9GZY0 626 aaKnown RBP4.73□□□□□ -1.65
MUC1-227ENST00000615517 LPAR5Q9H1C0 372 aa4.73□□□□□ -1.65
MUC1-227ENST00000615517 RBM7Q9Y580 266 aaKnown RBP4.73□□□□□ -1.65
MUC1-227ENST00000615517 PUS1Q9Y606 427 aaKnown RBP eCLIP4.73□□□□□ -1.65
MUC1-227ENST00000615517 IGHV3OR16-12A0A075B7B8 117 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 H3BMM0 161 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 DCTN3O75935 186 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 OXTP01178 125 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 PLA2G1BP04054 148 aaKnown RBP4.72□□□□□ -1.65
MUC1-227ENST00000615517 UBBP0CG47 229 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 OR13C7P0DN81 318 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 FGF9P31371 208 aaPredicted RBP4.72□□□□□ -1.65
MUC1-227ENST00000615517 ETV1P50549 477 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 FXYD7P58549 80 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 TIMM50Q3ZCQ8 353 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 PLAC9Q5JTB6 97 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 TMEM69Q5SWH9 247 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 ZNF773Q6PK81 442 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 TOMM20LQ6UXN7 152 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 LRRTM1Q86UE6 522 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 FAM89BQ8N5H3 189 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 NKAIN3Q8N8D7 197 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 ZFP41Q8N8Y5 198 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 STXBP6Q8NFX7 210 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 OR4S2Q8NH73 311 aa4.72□□□□□ -1.65
MUC1-227ENST00000615517 MAFIPQ8WZ33 124 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms