RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 GON7Q9BXV9 100 aa4.34□□□□□ -1.72
CPNE3-208ENST00000614678 AGRNO00468 2067 aa4.34□□□□□ -1.72
CPNE3-208ENST00000614678 LY86O95711 162 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 IFNA6P05013 189 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 AKR1C4P17516 323 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 PSMB6P28072 239 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 KLF9Q13886 244 aaPredicted RBP4.33□□□□□ -1.72
CPNE3-208ENST00000614678 ZNF343Q6P1L6 599 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 Q8N402 240 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 TMEM229BQ8NBD8 167 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 UBAC2Q8NBM4 344 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 RCC1LQ96I51 464 aaKnown RBP4.33□□□□□ -1.72
CPNE3-208ENST00000614678 CMTM3Q96MX0 182 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 PLEKHA2Q9HB19 425 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 BET1LQ9NYM9 111 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 ZNF580Q9UK33 172 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 OR51B2Q9Y5P1 312 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 DNAH7Q8WXX0 4024 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 C3orf85A0A1B0GTC6 90 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 OR2T8A6NH00 312 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 MPTX1A8MV57 137 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 CLEC3BP05452 202 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 GPR183P32249 361 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 TAS2R31P59538 309 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 TM4SF20Q53R12 229 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 PYHIN1Q6K0P9 492 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 COMMD1Q8N668 190 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 OR5M8Q8NGP6 311 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 NDUFA4L2Q9NRX3 87 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 HYDINQ4G0P3 5121 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 IGLV11-55A0A075B6I3 123 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 RRASP10301 218 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 CBX3Q13185 183 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 KLF5Q13887 457 aaPredicted RBP4.33□□□□□ -1.72
CPNE3-208ENST00000614678 ACSM6Q6P461 480 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 TMED4Q7Z7H5 227 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 TMEM170AQ8WVE7 144 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 PINX1Q96BK5 328 aaKnown RBP4.33□□□□□ -1.72
CPNE3-208ENST00000614678 SRRQ9GZT4 340 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 GPR132Q9UNW8 380 aa4.33□□□□□ -1.72
CPNE3-208ENST00000614678 C13orf42A0A1B0GVH6 325 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 HRASP01112 189 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 HSPB1P04792 205 aaKnown RBP4.32□□□□□ -1.72
CPNE3-208ENST00000614678 P0C879 139 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 DEFA4P12838 97 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 ADMP35318 185 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 TAS2R19P59542 299 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 CATR1Q13166 79 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 LYZL2Q7Z4W2 148 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 CMTM1Q8IZ96 169 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 OR6Q1Q8NGQ2 317 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 PEF1Q9UBV8 284 aaKnown RBP4.32□□□□□ -1.72
CPNE3-208ENST00000614678 ST8SIA3O43173 380 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 CSN3P07498 182 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 PRB4P10163 310 aaPredicted RBP4.32□□□□□ -1.72
CPNE3-208ENST00000614678 BTCP35070 178 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 RUNX1Q01196 453 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 SLC38A6Q8IZM9 456 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 LILRB2Q8N423 598 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 SPIN2AQ99865 258 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 SPIN2BQ9BPZ2 258 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 COMMD5Q9GZQ3 224 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 TMEM14BQ9NUH8 114 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 K7EIM0 57 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 SERPINE2P07093 398 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 CRYGCP07315 174 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 CD7P09564 240 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 ZNF124Q15973 351 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 POU2AF1Q16633 256 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 TRIM16LQ309B1 348 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 ANKRD55Q3KP44 614 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 SLC25A24Q6NUK1 477 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 SCARB1Q8WTV0 552 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 WDR89Q96FK6 387 aaPredicted RBP4.32□□□□□ -1.72
CPNE3-208ENST00000614678 LSM4Q9Y4Z0 139 aaKnown RBP4.32□□□□□ -1.72
CPNE3-208ENST00000614678 IGHV3-66A0A0C4DH42 116 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 ZNF320A2RRD8 509 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 C15orf61A6NNL5 157 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 RBFOX2O43251 390 aaKnown RBP eCLIP4.32□□□□□ -1.72
CPNE3-208ENST00000614678 SLC22A5O76082 557 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 OR8U8P0C7N1 319 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 AKAIN1P0CW23 69 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 ATP5G2Q06055 141 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 SBSPONQ8IVN8 264 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 SELENOHQ8IZQ5 122 aaKnown RBP4.32□□□□□ -1.72
CPNE3-208ENST00000614678 SLC35G3Q8N808 338 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 ZBTB34Q8NCN2 500 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 OR52B4Q8NGK2 314 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 GPR146Q96CH1 333 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 FNDC4Q9H6D8 234 aaPredicted RBP4.32□□□□□ -1.72
CPNE3-208ENST00000614678 SLA2Q9H6Q3 261 aa4.32□□□□□ -1.72
CPNE3-208ENST00000614678 NOL3O60936 208 aaKnown RBP4.31□□□□□ -1.72
CPNE3-208ENST00000614678 TMEM127O75204 238 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 APOHP02749 345 aaPredicted RBP4.31□□□□□ -1.72
CPNE3-208ENST00000614678 UCP3P55916 312 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 RPEL1Q2QD12 228 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 CD300EQ496F6 205 aaPredicted RBP4.31□□□□□ -1.72
CPNE3-208ENST00000614678 TMEM268Q5VZI3 342 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 Q8N1Y9 231 aa4.31□□□□□ -1.72
CPNE3-208ENST00000614678 ARRDC1Q8N5I2 433 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms