RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 RPUSD1Q9UJJ7 312 aaKnown RBP11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 A0A1W2PPQ1 181 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 B4DEV8 164 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 LYNX1G3V0Z9 82 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 IL6RP08887 468 aaPredicted RBP11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 C1QTNF9P0C862 333 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 LYNX1P0DP58 116 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 SPACA3Q8IXA5 215 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 NEIL1Q96FI4 390 aaPredicted RBP11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 PCGF1Q9BSM1 259 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 SAP30LQ9HAJ7 183 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 TMEM14BQ9NUH8 114 aa11.5□□□□□ -0.57
PCDHGA3-202ENST00000612467 THBS3P49746 956 aa11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 FAM3BP58499 235 aaPredicted RBP11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 HSPE1P61604 102 aaKnown RBP11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 C10orf55Q5SWW7 151 aa11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 J3QR06 171 aa11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 SAA1P0DJI8 122 aaPredicted RBP11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 CHRNB4P30926 498 aa11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 TMEM200BQ69YZ2 307 aa11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 SLC25A48Q6ZT89 311 aaKnown RBP11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 DMRTC2Q8IXT2 367 aaPredicted RBP11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 STPG3Q8N7X2 389 aa11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 FAM216AQ8WUB2 273 aa11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 LRFN3Q9BTN0 628 aa11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 SCNM1Q9BWG6 230 aa11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 MANBALQ9NQG1 85 aa11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 CTSZQ9UBR2 303 aa11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 YTHDF2Q9Y5A9 579 aaKnown RBP11.49□□□□□ -0.57
PCDHGA3-202ENST00000612467 CHD8Q9HCK8 2581 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 ARHGAP32A7KAX9 2087 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 TRBV20OR9-2A0A075B6H5 130 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 IGKV1OR2-108A0A075B7D4 117 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 SCO2A0A1W2PP80 73 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 ZNF729A6NN14 1252 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 PLAUP00749 431 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 PFN1P07737 140 aaKnown RBP11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 GALR1P47211 349 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 OR52E5Q8NH55 327 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 RALYQ9UKM9 306 aaKnown RBP11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 MALRD1Q5VYJ5 2156 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 SEC14L6B5MCN3 397 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 TMEM250H0YL14 139 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 H7BYZ3 331 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 PHOX2AO14813 284 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 S100A8P05109 93 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 S100PP25815 95 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 GPX4P36969 197 aaPredicted RBP11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 NBL1P41271 181 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 C3orf36Q3SXR2 165 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 PYY3Q5JQD4 70 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 TEX36Q5VZQ5 186 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 NUP37Q8NFH4 326 aa11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 LSM4Q9Y4Z0 139 aaKnown RBP11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 ANKHD1Q8IWZ3 2542 aaKnown RBP11.48□□□□□ -0.57
PCDHGA3-202ENST00000612467 IGHV3-72A0A0B4J1Y9 119 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 A0A0U1RQK1 487 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 SNRPCP09234 159 aaKnown RBP11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 OPRK1P41145 380 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 TBR1Q16650 682 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 OR10D4PQ8NGN7 298 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 OR4X1Q8NH49 305 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 RITA1Q96K30 269 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 DIRC2Q96SL1 478 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 GGACTQ9BVM4 153 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 ENY2Q9NPA8 101 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 FOXA2Q9Y261 457 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 HRNRQ86YZ3 2850 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 TEX50A0A1B0GTY4 177 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 hADV38S2A0JD32 116 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 FAM90A9PA6NNJ1 464 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 APELAP0DMC3 54 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 GRNP28799 593 aaKnown RBP11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 CDX1P47902 265 aaPredicted RBP11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 EFNB3Q15768 340 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 MIR17HGQ75NE6 70 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 NPVFQ9HCQ7 196 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 NCOR2Q9Y618 2525 aa11.47□□□□□ -0.57
PCDHGA3-202ENST00000612467 A0A1B0GV90 55 aa11.46□□□□□ -0.57
PCDHGA3-202ENST00000612467 KIR2DS2P43631 304 aa11.46□□□□□ -0.57
PCDHGA3-202ENST00000612467 RPP30P78346 268 aaKnown RBP11.46□□□□□ -0.57
PCDHGA3-202ENST00000612467 SSBP2P81877 361 aaPredicted RBP11.46□□□□□ -0.57
PCDHGA3-202ENST00000612467 ASPHD1Q5U4P2 390 aa11.46□□□□□ -0.57
PCDHGA3-202ENST00000612467 MED13LQ71F56 2210 aa11.46□□□□□ -0.57
PCDHGA3-202ENST00000612467 PPIAL4EA0A075B759 164 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 E7EQL1 145 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 PPIAL4DF5H284 164 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 TMEM178BH3BS89 294 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 UPK2O00526 184 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 PPIAL4FP0DN26 164 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 TNFRSF1AP19438 455 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 LGALS4P56470 323 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 PMS2P11Q13670 270 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 TEPPQ6URK8 271 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 C19orf35Q6ZS72 473 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 OR4P4Q8NGL7 312 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 OR9G1Q8NH87 305 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 PLEKHA3Q9HB20 300 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 TMEM242Q9NWH2 141 aa11.46□□□□□ -0.58
PCDHGA3-202ENST00000612467 PPIAL4AQ9Y536 164 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms