RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	IGKV1D-33	P01593	117 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	IGKV1-33	P01594	117 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	PRB1	P04280	392 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	SELL	P14151	372 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	CD99	P14209	185 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	ACSM6	Q6P461	480 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	ZNF664	Q8N3J9	261 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	ZNRF1	Q8ND25	227 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	OR10G9	Q8NGN4	311 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	OR10G7	Q8NGN6	311 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	FAM222B	Q8WU58	562 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	TMEM204	Q9BSN7	226 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	NCOR1P1	Q9H4R4	102 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	OR6C3	Q9NZP0	311 aa		11.42	□□□□□ -0.58
COPS7B-223	ENST00000611614	PKDREJ	Q9NTG1	2253 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	RELN	P78509	3460 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	FAM90A9P	A6NNJ1	464 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	FCGR3B	O75015	233 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	LOXL3	P58215	753 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	SPCS3	P61009	180 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	GNB2	P62879	340 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	VWC2	Q2TAL6	325 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	OR4F5	Q8NH21	305 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	OR4F4	Q96R69	305 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	PCGF1	Q9BSM1	259 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	QTRT1	Q9BXR0	403 aa	Known RBP	11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614		M0R1X1	148 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	OR9G9	P0C7N8	305 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	EDDM3B	P56851	147 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	IQCJ	Q1A5X6	159 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	TMEM249	Q2WGJ8	235 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	AARD	Q4LEZ3	155 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	SPINK9	Q5DT21	86 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	ZNF709	Q8N972	641 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	NECAP1	Q8NC96	275 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	CCL17	Q92583	94 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	BBC3	Q96PG8	261 aa	Predicted RBP	11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	IMMP2L	Q96T52	175 aa		11.41	□□□□□ -0.58
COPS7B-223	ENST00000611614	C17orf112	F2Z3M2	114 aa		11.4	□□□□□ -0.58
COPS7B-223	ENST00000611614	NDUFB7	P17568	137 aa		11.4	□□□□□ -0.58
COPS7B-223	ENST00000611614	FFAR4	Q5NUL3	377 aa		11.4	□□□□□ -0.58
COPS7B-223	ENST00000611614	DEFB108B	Q8NET1	73 aa		11.4	□□□□□ -0.58
COPS7B-223	ENST00000611614	SLC25A22	Q9H936	323 aa		11.4	□□□□□ -0.58
COPS7B-223	ENST00000611614	CALY	Q9NYX4	217 aa		11.4	□□□□□ -0.58
COPS7B-223	ENST00000611614	TRAV38-1	A0A0B4J264	116 aa		11.4	□□□□□ -0.59
COPS7B-223	ENST00000611614	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.4	□□□□□ -0.59	8e-7	■■■■■ 27.8
COPS7B-223	ENST00000611614	CGB3	P0DN86	165 aa		11.4	□□□□□ -0.59
COPS7B-223	ENST00000611614	CGB7	P0DN87	165 aa		11.4	□□□□□ -0.59
COPS7B-223	ENST00000611614	RPS16	P62249	146 aa	Known RBP	11.4	□□□□□ -0.59
COPS7B-223	ENST00000611614	HNF4G	Q14541	408 aa		11.4	□□□□□ -0.59
COPS7B-223	ENST00000611614	FAM201A	Q5SY85	155 aa		11.4	□□□□□ -0.59
COPS7B-223	ENST00000611614	C1orf122	Q6ZSJ8	110 aa		11.4	□□□□□ -0.59
COPS7B-223	ENST00000611614	ZNF843	Q8N446	348 aa		11.4	□□□□□ -0.59
COPS7B-223	ENST00000611614	IFI27L2	Q9H2X8	130 aa		11.4	□□□□□ -0.59
COPS7B-223	ENST00000611614	EPG5	Q9HCE0	2579 aa		11.39	□□□□□ -0.59
COPS7B-223	ENST00000611614		A0A1W2PPQ1	181 aa		11.39	□□□□□ -0.59
COPS7B-223	ENST00000611614	ITGB1BP1	O14713	200 aa		11.39	□□□□□ -0.59
COPS7B-223	ENST00000611614	ZNF134	P52741	427 aa		11.39	□□□□□ -0.59
COPS7B-223	ENST00000611614	RPL39P5	Q59GN2	51 aa		11.39	□□□□□ -0.59
COPS7B-223	ENST00000611614	PRAMEF5	Q5TYX0	476 aa		11.39	□□□□□ -0.59
COPS7B-223	ENST00000611614	RAB9B	Q9NP90	201 aa		11.39	□□□□□ -0.59
COPS7B-223	ENST00000611614	TMEM106B	Q9NUM4	274 aa		11.39	□□□□□ -0.59
COPS7B-223	ENST00000611614	C15orf62	A8K5M9	175 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	PDE6D	O43924	150 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	LOX	P28300	417 aa	Predicted RBP	11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	KIR2DS2	P43631	304 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	HCFC1	P51610	2035 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	OR4A16	Q8NH70	328 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	MISP3	Q96FF7	219 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	NPCDR1	Q9BY65	106 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	CHODL	Q9H9P2	273 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	FUT9	Q9Y231	359 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	ABCA4	P78363	2273 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	PPIAL4E	A0A075B759	164 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	IGHV1-69-2	A0A0G2JMI3	117 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	NKX6-3	A6NJ46	265 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	PPIAL4D	F5H284	164 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	TMPRSS2	O15393	492 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	PPIAL4F	P0DN26	164 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	RAB7A	P51149	207 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	CNN1	P51911	297 aa	Known RBP	11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	ERVK-16	P61578	105 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	C17orf58	Q2M2W7	97 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	SDSL	Q96GA7	329 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	S1PR3	Q99500	378 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	ELOVL1	Q9BW60	279 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	RAB1B	Q9H0U4	201 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	CBLN4	Q9NTU7	201 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614	PPIAL4A	Q9Y536	164 aa		11.38	□□□□□ -0.59
COPS7B-223	ENST00000611614		F6UZH7	168 aa		11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	IGHV3-7	P01780	117 aa		11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	RPP30	P78346	268 aa	Known RBP	11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	USF2	Q15853	346 aa	Predicted RBP	11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	GBGT1	Q8N5D6	347 aa		11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	OR52E5	Q8NH55	327 aa		11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	TMEM37	Q8WXS4	190 aa		11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	TXNDC17	Q9BRA2	123 aa		11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	FAM234A	Q9H0X4	552 aa		11.37	□□□□□ -0.59
COPS7B-223	ENST00000611614	ZFYVE26	Q68DK2	2539 aa		11.37	□□□□□ -0.59

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