RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 DCSTAMPQ9H295 470 aa12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 C21orf62Q9NYP8 219 aa12.72□□□□□ -0.37
CHMP4A-211ENST00000609024 IGLC7A0M8Q6 106 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 CGB1A6NKQ9 187 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 YIF1AO95070 293 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 OR13C7P0DN81 318 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 NQO2P16083 231 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 TAS2R31P59538 309 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 CATR1Q13166 79 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 GDPD1Q8N9F7 314 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 TMEM116Q8NCL8 245 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 SECTM1Q8WVN6 248 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 RNF2Q99496 336 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 VCXQ9H320 206 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 SMPXQ9UHP9 88 aa12.71□□□□□ -0.37
CHMP4A-211ENST00000609024 IGHV3-21A0A0B4J1V1 117 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 IFITM5A6NNB3 132 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 UPK2O00526 184 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 HPRT1P00492 218 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 EIF4EP06730 217 aaKnown RBP12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 TRAPPC2P0DI81 140 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 TRAPPC2BP0DI82 140 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 MYL9P24844 172 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 GNG2P59768 71 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 ARPC4P59998 168 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 FABP5Q01469 135 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 RELQ04864 619 aaPredicted RBP12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 HACD4Q5VWC8 232 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 GPHA2Q96T91 129 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 ATP6V0BQ99437 205 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 RHPN1-AS1Q9BWJ2 59 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 HINT2Q9BX68 163 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 TPRKBQ9Y3C4 175 aa12.7□□□□□ -0.38
CHMP4A-211ENST00000609024 PRSS29PA6NIE9 313 aa12.69□□□□□ -0.38
CHMP4A-211ENST00000609024 SERPINE2P07093 398 aa12.69□□□□□ -0.38
CHMP4A-211ENST00000609024 OR10A3P58181 314 aa12.69□□□□□ -0.38
CHMP4A-211ENST00000609024 BRWD1-AS2P59051 145 aa12.69□□□□□ -0.38
CHMP4A-211ENST00000609024 MLLT11Q13015 90 aaPredicted RBP12.69□□□□□ -0.38
CHMP4A-211ENST00000609024 GBGT1Q8N5D6 347 aa12.69□□□□□ -0.38
CHMP4A-211ENST00000609024 OR10W1Q8NGF6 305 aa12.69□□□□□ -0.38
CHMP4A-211ENST00000609024 CHRDL1Q9BU40 450 aa12.69□□□□□ -0.38
CHMP4A-211ENST00000609024 HRH4Q9H3N8 390 aa12.69□□□□□ -0.38
CHMP4A-211ENST00000609024 ANXA10Q9UJ72 324 aa12.69□□□□□ -0.38
CHMP4A-211ENST00000609024 ELF5Q9UKW6 265 aaPredicted RBP12.69□□□□□ -0.38
CHMP4A-211ENST00000609024 ETV7Q9Y603 341 aa12.69□□□□□ -0.38
CHMP4A-211ENST00000609024 IGHV3-49A0A0A0MS15 119 aa12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 TRAV10A0A0B4J240 114 aa12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 IGHV7-4-1A0A0J9YVY3 117 aa12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 DNASE2O00115 360 aaPredicted RBP12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 SULT1C2O00338 296 aa12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 CASQ2O14958 399 aaPredicted RBP12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 NUPL2O15504 423 aaKnown RBP12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 RBFOX2O43251 390 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 ERVK-16P61578 105 aa12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 EIF4EBP1Q13541 118 aaPredicted RBP12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 RCN1Q15293 331 aa12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 ZBTB34Q8NCN2 500 aa12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 SCARB1Q8WTV0 552 aa12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 CCL28Q9NRJ3 127 aa12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 TMEM140Q9NV12 185 aa12.68□□□□□ -0.38
CHMP4A-211ENST00000609024 IGHV4-4A0A075B6R2 117 aa12.67□□□□□ -0.38
CHMP4A-211ENST00000609024 TRAV3A0A0B4J244 114 aa12.67□□□□□ -0.38
CHMP4A-211ENST00000609024 CHEK1O14757 476 aa12.67□□□□□ -0.38
CHMP4A-211ENST00000609024 CD5P06127 495 aa12.67□□□□□ -0.38
CHMP4A-211ENST00000609024 RAB3BP20337 219 aa12.67□□□□□ -0.38
CHMP4A-211ENST00000609024 RPL11P62913 178 aaKnown RBP12.67□□□□□ -0.38
CHMP4A-211ENST00000609024 STHQ8IWL8 128 aa12.67□□□□□ -0.38
CHMP4A-211ENST00000609024 OR1L8Q8NGR8 309 aa12.67□□□□□ -0.38
CHMP4A-211ENST00000609024 NUDCD2Q8WVJ2 157 aa12.67□□□□□ -0.38
CHMP4A-211ENST00000609024 DNAH6Q9C0G6 4158 aa12.67□□□□□ -0.38
CHMP4A-211ENST00000609024 VPS13DQ5THJ4 4388 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 TRAV14DV4A0A0A6YYC5 116 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 TRAV1-2A0A0B4J238 106 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 C15orf61A6NNL5 157 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 RGS10O43665 173 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 SCGNO76038 276 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 HLA-DMBP28068 263 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 FCGR2CP31995 323 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 MSMO1Q15800 293 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 PVRIGQ6DKI7 326 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 OR13F1Q8NGS4 319 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 LSM10Q969L4 123 aaKnown RBP12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 MGLLQ99685 303 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 SLC5A7Q9GZV3 580 aa12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 F11RQ9Y624 299 aaKnown RBP12.66□□□□□ -0.38
CHMP4A-211ENST00000609024 TMEM235A6NFC5 223 aa12.65□□□□□ -0.38
CHMP4A-211ENST00000609024 FGF2P09038 288 aa12.65□□□□□ -0.38
CHMP4A-211ENST00000609024 P0DMU3 169 aa12.65□□□□□ -0.38
CHMP4A-211ENST00000609024 FAM231AP0DMU4 169 aa12.65□□□□□ -0.38
CHMP4A-211ENST00000609024 FAM231CP0DMU5 169 aa12.65□□□□□ -0.38
CHMP4A-211ENST00000609024 WT1-ASQ06250 92 aa12.65□□□□□ -0.38
CHMP4A-211ENST00000609024 AADACL3Q5VUY0 350 aa12.65□□□□□ -0.38
CHMP4A-211ENST00000609024 GINS3Q9BRX5 216 aa12.65□□□□□ -0.38
CHMP4A-211ENST00000609024 IGHV3OR16-13A0A075B7E8 117 aa12.64□□□□□ -0.39
CHMP4A-211ENST00000609024 IGHV3-74A0A0B4J1X5 117 aa12.64□□□□□ -0.39
CHMP4A-211ENST00000609024 TEX50A0A1B0GTY4 177 aa12.64□□□□□ -0.39
CHMP4A-211ENST00000609024 A0A1B0GVY2 172 aa12.64□□□□□ -0.39
CHMP4A-211ENST00000609024 SNAPC5O75971 98 aa12.64□□□□□ -0.39
CHMP4A-211ENST00000609024 DFFBO76075 338 aa12.64□□□□□ -0.39
CHMP4A-211ENST00000609024 MIFP14174 115 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms