RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 ZNF137PP52743 207 aa8.67□□□□□ -1.02
CTCFL-216ENST00000608263 PRB3Q04118 309 aaPredicted RBP8.67□□□□□ -1.02
CTCFL-216ENST00000608263 TMEM183BQ1AE95 376 aa8.67□□□□□ -1.02
CTCFL-216ENST00000608263 Q6ZN92 141 aa8.67□□□□□ -1.02
CTCFL-216ENST00000608263 SFRP2Q96HF1 295 aa8.67□□□□□ -1.02
CTCFL-216ENST00000608263 TECRQ9NZ01 308 aaKnown RBP8.67□□□□□ -1.02
CTCFL-216ENST00000608263 SLC31A2O15432 143 aa8.67□□□□□ -1.02
CTCFL-216ENST00000608263 MFAP2P55001 183 aa8.67□□□□□ -1.02
CTCFL-216ENST00000608263 SPCS3P61009 180 aa8.67□□□□□ -1.02
CTCFL-216ENST00000608263 ACSF3Q4G176 576 aaPredicted RBP8.67□□□□□ -1.02
CTCFL-216ENST00000608263 ZNF585BQ52M93 769 aa8.67□□□□□ -1.02
CTCFL-216ENST00000608263 RPEQ96AT9 228 aa8.67□□□□□ -1.02
CTCFL-216ENST00000608263 STARD4Q96DR4 205 aa8.67□□□□□ -1.02
CTCFL-216ENST00000608263 HARBI1Q96MB7 349 aa8.67□□□□□ -1.02
CTCFL-216ENST00000608263 OR51B2Q9Y5P1 312 aa8.67□□□□□ -1.02
CTCFL-216ENST00000608263 HIVEP2P31629 2446 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 FAM90A26D6RGX4 464 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 IL18BPO95998 194 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 IGKV1-39P01597 117 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 IGHV2-70P01814 119 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 IGKV1D-39P04432 117 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 CECR9P0C854 216 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 USF1P22415 310 aaPredicted RBP8.66□□□□□ -1.02
CTCFL-216ENST00000608263 NUBP1P53384 320 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 CD81P60033 236 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 FOXF2Q12947 444 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 ZNF497Q6ZNH5 498 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 TMEM256Q8N2U0 113 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 OR2D3Q8NGH3 330 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 SSC4DQ8WTU2 575 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 CFAP54Q96N23 3096 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 IGLV3-1P01715 115 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 OR9G9P0C7N8 305 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 SRP14P37108 136 aaKnown RBP8.66□□□□□ -1.02
CTCFL-216ENST00000608263 ZNF726P1Q15940 193 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 FOXL2NBQ6ZUU3 175 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 OR1B1Q8NGR6 318 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 TMEM210A6NLX4 147 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 DIRC3C9JPN6 131 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 CHEK1O14757 476 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 IGKV1D-33P01593 117 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 IGKV1-33P01594 117 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 REG1AP05451 166 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 MYOD1P15172 320 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 IGFBP2P18065 325 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 PRR30Q53SZ7 412 aaPredicted RBP8.66□□□□□ -1.02
CTCFL-216ENST00000608263 Q56UQ5 140 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 ASCL4Q6XD76 172 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 ACP7Q6ZNF0 438 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 STPG3Q8N7X2 389 aa8.66□□□□□ -1.02
CTCFL-216ENST00000608263 MGST3O14880 152 aa8.65□□□□□ -1.02
CTCFL-216ENST00000608263 COX6B1P14854 86 aa8.65□□□□□ -1.02
CTCFL-216ENST00000608263 TCF15Q12870 199 aa8.65□□□□□ -1.02
CTCFL-216ENST00000608263 HCP5Q6MZN7 132 aa8.65□□□□□ -1.02
CTCFL-216ENST00000608263 LHFPL4Q7Z7J7 247 aa8.65□□□□□ -1.02
CTCFL-216ENST00000608263 MBD3L1Q8WWY6 194 aa8.65□□□□□ -1.02
CTCFL-216ENST00000608263 SPSB4Q96A44 273 aa8.65□□□□□ -1.02
CTCFL-216ENST00000608263 CALYQ9NYX4 217 aa8.65□□□□□ -1.02
CTCFL-216ENST00000608263 ABCA12Q86UK0 2595 aa8.65□□□□□ -1.02
CTCFL-216ENST00000608263 GCGP01275 180 aa8.65□□□□□ -1.02
CTCFL-216ENST00000608263 SUB1P53999 127 aaKnown RBP eCLIP8.65□□□□□ -1.025e-7■■■□□ 15.8
CTCFL-216ENST00000608263 GABRA6Q16445 453 aa8.65□□□□□ -1.02
CTCFL-216ENST00000608263 FGF23Q9GZV9 251 aaPredicted RBP8.65□□□□□ -1.02
CTCFL-216ENST00000608263 RNF7Q9UBF6 113 aa8.65□□□□□ -1.02
CTCFL-216ENST00000608263 TRAV3A0A0B4J244 114 aa8.65□□□□□ -1.03
CTCFL-216ENST00000608263 SERTM2A0A1B0GWG4 89 aa8.65□□□□□ -1.03
CTCFL-216ENST00000608263 IFNL4K9M1U5 179 aa8.65□□□□□ -1.03
CTCFL-216ENST00000608263 CA2P00918 260 aa8.65□□□□□ -1.03
CTCFL-216ENST00000608263 RAB7AP51149 207 aa8.65□□□□□ -1.03
CTCFL-216ENST00000608263 TAS2R60P59551 318 aa8.65□□□□□ -1.03
CTCFL-216ENST00000608263 VAMP3Q15836 100 aa8.65□□□□□ -1.03
CTCFL-216ENST00000608263 MMD2Q8IY49 270 aa8.65□□□□□ -1.03
CTCFL-216ENST00000608263 FAM19A2Q8N3H0 131 aa8.65□□□□□ -1.03
CTCFL-216ENST00000608263 C14orf144Q96I85 54 aa8.65□□□□□ -1.03
CTCFL-216ENST00000608263 LINC00473A8K010 186 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 RBP4P02753 201 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 GPR6P46095 362 aaPredicted RBP8.64□□□□□ -1.03
CTCFL-216ENST00000608263 RNF115Q9Y4L5 304 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 IGHV3OR16-10A0A075B7F0 116 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 SCGB2A1O75556 95 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 GCHFRP30047 84 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 SRIP30626 198 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 SPATA31B1PQ5VZV4 182 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 OCC1Q8TAD7 63 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 WNT10AQ9GZT5 417 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 DCAF16Q9NXF7 216 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 SPRR3Q9UBC9 169 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 SZT2Q5T011 3432 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 IL6RP08887 468 aaPredicted RBP8.64□□□□□ -1.03
CTCFL-216ENST00000608263 ATP5J2P56134 94 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 Q6ZT83 130 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 HAPLN4Q86UW8 402 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 FLYWCH2Q96CP2 140 aaKnown RBP8.64□□□□□ -1.03
CTCFL-216ENST00000608263 NOL4LQ96MY1 436 aaPredicted RBP8.64□□□□□ -1.03
CTCFL-216ENST00000608263 CHD3Q12873 2000 aaKnown RBP8.64□□□□□ -1.03
CTCFL-216ENST00000608263 TRBV24-1A0A075B6N3 115 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 CT45A6P0DMU7 189 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 CT45A5P0DMU8 189 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 CT45A7P0DMV0 189 aa8.64□□□□□ -1.03
CTCFL-216ENST00000608263 TBR1Q16650 682 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms