RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 AKAP6Q13023 2319 aa12.21□□□□□ -0.45
CCDC12-211ENST00000604367 ACACBO00763 2458 aa12.21□□□□□ -0.45
CCDC12-211ENST00000604367 E7EUB6 86 aa12.21□□□□□ -0.46
CCDC12-211ENST00000604367 H3BQ15 152 aa12.21□□□□□ -0.46
CCDC12-211ENST00000604367 RPL8P62917 257 aaKnown RBP12.21□□□□□ -0.46
CCDC12-211ENST00000604367 DLK1P80370 383 aa12.21□□□□□ -0.46
CCDC12-211ENST00000604367 SSMEM1Q8WWF3 244 aa12.21□□□□□ -0.46
CCDC12-211ENST00000604367 NEIL1Q96FI4 390 aaPredicted RBP12.21□□□□□ -0.46
CCDC12-211ENST00000604367 GGACTQ9BVM4 153 aa12.21□□□□□ -0.46
CCDC12-211ENST00000604367 PATZ1Q9HBE1 687 aaKnown RBP12.21□□□□□ -0.46
CCDC12-211ENST00000604367 SMCO4Q9NRQ5 59 aa12.21□□□□□ -0.46
CCDC12-211ENST00000604367 FKBP11Q9NYL4 201 aa12.21□□□□□ -0.46
CCDC12-211ENST00000604367 PLXNB1O43157 2135 aa12.21□□□□□ -0.46
CCDC12-211ENST00000604367 CDKN1AP38936 164 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 ZNF137PP52743 207 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 MIC13Q5XKP0 118 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 FAM71F2Q6NXP2 309 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 RAB1CQ92928 201 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 ISOC2Q96AB3 205 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 TIMD4Q96H15 378 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 NPVFQ9HCQ7 196 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 ONECUT1Q9UBC0 465 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 MIOXQ9UGB7 285 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 CYB5BO43169 146 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 IL3RAP26951 378 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 ACOT6Q3I5F7 207 aaPredicted RBP12.2□□□□□ -0.46
CCDC12-211ENST00000604367 C16orf54Q6UWD8 224 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 OR5B3Q8NH48 314 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 GATAD1Q8WUU5 269 aa12.2□□□□□ -0.46
CCDC12-211ENST00000604367 ITLN2Q8WWU7 325 aaPredicted RBP12.2□□□□□ -0.46
CCDC12-211ENST00000604367 SPTAN1Q13813 2472 aaKnown RBP12.2□□□□□ -0.46
CCDC12-211ENST00000604367 ASH1LQ9NR48 2969 aaKnown RBP12.19□□□□□ -0.46
CCDC12-211ENST00000604367 A0A1W2PPH5 198 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 C22orf46C9J442 243 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 MPDU1O75352 247 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 FSTL3O95633 263 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 CDC34P49427 236 aaPredicted RBP12.19□□□□□ -0.46
CCDC12-211ENST00000604367 RAB13P51153 203 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 HLA-DRB5Q30154 266 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 C10orf55Q5SWW7 151 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 MOB3BQ86TA1 216 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 C1orf159Q96HA4 380 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 GGTLC1Q9BX51 225 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 VAX2Q9UIW0 290 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 PXMP4Q9Y6I8 212 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 SLC25A17O43808 307 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 USF1P22415 310 aaPredicted RBP12.19□□□□□ -0.46
CCDC12-211ENST00000604367 PRRX1P54821 245 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 C4orf17Q53FE4 359 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 TPSG1Q9NRR2 321 aa12.19□□□□□ -0.46
CCDC12-211ENST00000604367 COL12A1Q99715 3063 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 C19orf84I3L1E1 186 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 NDUFS7O75251 213 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 IFNA1P01562 189 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 IGLV1-47P01700 117 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 IGLV2-23P01705 113 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 OPRK1P41145 380 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 RELQ04864 619 aaPredicted RBP12.18□□□□□ -0.46
CCDC12-211ENST00000604367 TEPPQ6URK8 271 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 LINC00518Q8N0U6 118 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 NEU4Q8WWR8 484 aaPredicted RBP12.18□□□□□ -0.46
CCDC12-211ENST00000604367 NIPSNAP3BQ9BS92 247 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 CLEC7AQ9BXN2 247 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 UBTD1Q9HAC8 227 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 SIRT7Q9NRC8 400 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 LSM4Q9Y4Z0 139 aaKnown RBP12.18□□□□□ -0.46
CCDC12-211ENST00000604367 SVEP1Q4LDE5 3571 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 A0A1W2PPE2 198 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 YIF1AO95070 293 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 MC5RP33032 325 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 RHEBQ15382 184 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 MLANAQ16655 118 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 RBMS3Q6XE24 437 aaKnown RBP12.18□□□□□ -0.46
CCDC12-211ENST00000604367 VSTM2AQ8TAG5 236 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 PCGF1Q9BSM1 259 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 ZNF430Q9H8G1 570 aaPredicted RBP12.18□□□□□ -0.46
CCDC12-211ENST00000604367 NDUFA4L2Q9NRX3 87 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 INSIG2Q9Y5U4 225 aa12.18□□□□□ -0.46
CCDC12-211ENST00000604367 NAV3Q8IVL0 2385 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 A0A1W2PPV4 95 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 COLCA2A8K830 154 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 BUB1B-PAK6H3BSN5 160 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 ARF6P62330 175 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 FAM90A2PQ658T7 463 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 PNKDQ8N490 385 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 OR1L8Q8NGR8 309 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 TMEM167AQ8TBQ9 72 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 LIPFP07098 398 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 IGFBP2P18065 325 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 MEF2BQ02080 365 aaPredicted RBP12.17□□□□□ -0.46
CCDC12-211ENST00000604367 DTX2Q86UW9 622 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 TNFRSF14Q92956 283 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 CHODLQ9H9P2 273 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 MED13LQ71F56 2210 aa12.17□□□□□ -0.46
CCDC12-211ENST00000604367 RNASE2P10153 161 aaKnown RBP12.16□□□□□ -0.46
CCDC12-211ENST00000604367 TAGLN2P37802 199 aaKnown RBP12.16□□□□□ -0.46
CCDC12-211ENST00000604367 PSMB3P49720 205 aa12.16□□□□□ -0.46
CCDC12-211ENST00000604367 CD81P60033 236 aa12.16□□□□□ -0.46
CCDC12-211ENST00000604367 VMA21Q3ZAQ7 101 aa12.16□□□□□ -0.46
CCDC12-211ENST00000604367 SLC35E3Q7Z769 313 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms