RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 FAM90A13PP0C7W8 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A14PP0C7W9 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A24PP0C7X0 464 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 NRN1LQ496H8 165 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 KLF17Q5JT82 389 aaPredicted RBP12.7□□□□□ -0.38
FGFR2-222ENST00000604236 ZNF114Q8NC26 417 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 DPRXA6NFQ7 191 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.7□□□□□ -0.38
FGFR2-222ENST00000604236 RAB31Q13636 194 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 SLC35E4Q6ICL7 350 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 TNFRSF19Q9NS68 423 aa12.7□□□□□ -0.38
FGFR2-222ENST00000604236 F6UZH7 168 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 NDUFB3O43676 98 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 SOD3P08294 240 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 ERVK11-1P61568 191 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 HTD2P86397 168 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 SLC24A4Q8NFF2 622 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 OR1B1Q8NGR6 318 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 ATPIF1Q9UII2 106 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 HIST1H2BKO60814 126 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 HIST1H2BJP06899 126 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 CBLN1P23435 193 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 HIST1H2BOP23527 126 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 HIST1H2BBP33778 126 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 HIST1H2BDP58876 126 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 HIST1H2BCP62807 126 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 HIST2H2BEQ16778 126 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 KRTCAP3Q53RY4 240 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.69□□□□□ -0.38
FGFR2-222ENST00000604236 HIST1H2BHQ93079 126 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 HIST1H2BNQ99877 126 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 HIST1H2BMQ99879 126 aa12.69□□□□□ -0.38
FGFR2-222ENST00000604236 IGKV3-7A0A075B6H7 116 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 NCBP2LA6PVI3 153 aaKnown RBP12.68□□□□□ -0.38
FGFR2-222ENST00000604236 RBP4P02753 201 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 FRMD6-AS1P0C7T7 363 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 PYYP10082 97 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 C10orf91Q5T1B1 145 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 MRGPRGQ86SM5 289 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 ZNF835Q9Y2P0 537 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 TMEM210A6NLX4 147 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 SRRM4A7MD48 611 aaKnown RBP12.68□□□□□ -0.38
FGFR2-222ENST00000604236 IER3P46695 156 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 CD81P60033 236 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 KHDC3LQ587J8 217 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 NPIPB3Q92617 1050 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 NEIL1Q96FI4 390 aaPredicted RBP12.68□□□□□ -0.38
FGFR2-222ENST00000604236 CISD1Q9NZ45 108 aaKnown RBP12.68□□□□□ -0.38
FGFR2-222ENST00000604236 SH2D7A6NKC9 451 aaPredicted RBP12.68□□□□□ -0.38
FGFR2-222ENST00000604236 CNTFRP26992 372 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 GLRXP35754 106 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 BAGE3Q86Y29 109 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 BAGE2Q86Y30 109 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 STPG3Q8N7X2 389 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 OR4S2Q8NH73 311 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 SAMD10Q9BYL1 202 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 TPSG1Q9NRR2 321 aa12.68□□□□□ -0.38
FGFR2-222ENST00000604236 Q8TCH9 128 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 CTXND1A0A1B0GTU2 59 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 NKX6-3A6NJ46 265 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 RTL8BQ17RB0 113 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 RNASE7Q9H1E1 156 aaKnown RBP12.67□□□□□ -0.38
FGFR2-222ENST00000604236 PLSCR4Q9NRQ2 329 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 ITPR1Q14643 2758 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 PPIAL4EA0A075B759 164 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 IGHV3-49A0A0A0MS15 119 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 C15orf62A8K5M9 175 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 PPIAL4DF5H284 164 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 RAB29O14966 203 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 HPRT1P00492 218 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 CRYABP02511 175 aaKnown RBP12.67□□□□□ -0.38
FGFR2-222ENST00000604236 APOA2P02652 100 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 PPIAL4FP0DN26 164 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 CA5BP1Q8WTZ4 195 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 EGLN1Q9GZT9 426 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 PPIAL4AQ9Y536 164 aa12.67□□□□□ -0.38
FGFR2-222ENST00000604236 FN1P02751 2386 aaKnown RBP12.67□□□□□ -0.38
FGFR2-222ENST00000604236 TMSB15BA0A087X1C1 80 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 SRRM5B3KS81 715 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 PMCHP20382 165 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 CD82P27701 267 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 FAM90A2PQ658T7 463 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 PNKDQ8N490 385 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 A8MXE2 369 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 VSTM5A8MXK1 200 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 RPL23P62829 140 aaKnown RBP12.66□□□□□ -0.38
FGFR2-222ENST00000604236 TCF15Q12870 199 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 PQLC2Q6ZP29 291 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 CIB3Q96Q77 187 aaPredicted RBP12.66□□□□□ -0.38
FGFR2-222ENST00000604236 GGACTQ9BVM4 153 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 TRAPPC1Q9Y5R8 145 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 TGOLN2O43493 480 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 NDUFS7O75251 213 aa12.66□□□□□ -0.38
FGFR2-222ENST00000604236 CDKN1AP38936 164 aa12.65□□□□□ -0.38
FGFR2-222ENST00000604236 ZNF137PP52743 207 aa12.65□□□□□ -0.38
FGFR2-222ENST00000604236 ZNF506Q5JVG8 444 aa12.65□□□□□ -0.38
FGFR2-222ENST00000604236 TIMM23BQ5SRD1 257 aa12.65□□□□□ -0.38
FGFR2-222ENST00000604236 TRAT1Q6PIZ9 186 aa12.65□□□□□ -0.38
FGFR2-222ENST00000604236 TREML4Q6UXN2 200 aa12.65□□□□□ -0.38
FGFR2-222ENST00000604236 SPACA3Q8IXA5 215 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms