RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 YTHDF1Q9BYJ9 559 aaKnown RBP9.81□□□□□ -0.84
RPS28-204ENST00000602140 ZNF436Q9C0F3 470 aaPredicted RBP9.81□□□□□ -0.84
RPS28-204ENST00000602140 TEX50A0A1B0GTY4 177 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 OR2T8A6NH00 312 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 CYB5BO43169 146 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 FGF2P09038 288 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 TRAPPC2P0DI81 140 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 TRAPPC2BP0DI82 140 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 OR13C7P0DN81 318 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 GNRHRP30968 328 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 CBX5P45973 191 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 HERV-K104P61576 105 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 ERVK-16P61578 105 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 WT1-ASQ06250 92 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 SLC25A24Q6NUK1 477 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 SLC38A6Q8IZM9 456 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 GDPD1Q8N9F7 314 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 Q9H521 79 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 C5orf66Q9H5L9 145 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 IFT46Q9NQC8 304 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 COMMD9Q9P000 198 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 UBQLN2Q9UHD9 624 aa9.8□□□□□ -0.84
RPS28-204ENST00000602140 ALMS1Q8TCU4 4167 aa9.79□□□□□ -0.84
RPS28-204ENST00000602140 IGHV3-21A0A0B4J1V1 117 aa9.79□□□□□ -0.84
RPS28-204ENST00000602140 RLN1P04808 185 aa9.79□□□□□ -0.84
RPS28-204ENST00000602140 SERPINE2P07093 398 aa9.79□□□□□ -0.84
RPS28-204ENST00000602140 PMS2P11Q13670 270 aa9.79□□□□□ -0.84
RPS28-204ENST00000602140 THOC7Q6I9Y2 204 aaKnown RBP9.79□□□□□ -0.84
RPS28-204ENST00000602140 OR1L8Q8NGR8 309 aa9.79□□□□□ -0.84
RPS28-204ENST00000602140 TMEM190Q8WZ59 177 aa9.79□□□□□ -0.84
RPS28-204ENST00000602140 BORCS5Q969J3 196 aa9.79□□□□□ -0.84
RPS28-204ENST00000602140 SPAG8Q99932 426 aaPredicted RBP9.79□□□□□ -0.84
RPS28-204ENST00000602140 HINT2Q9BX68 163 aa9.79□□□□□ -0.84
RPS28-204ENST00000602140 EHFQ9NZC4 300 aa9.79□□□□□ -0.84
RPS28-204ENST00000602140 A0A0J9YWU9 116 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 CXorf65A6NEN9 183 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 MARCH11A6NNE9 402 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 TSPAN4O14817 238 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 XRCC3O43542 346 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 ATP6V1G2O95670 118 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 F2RP25116 425 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 RFX2P48378 723 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 MFAP2P55001 183 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 APOC4P55056 127 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 NEDD8Q15843 81 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 DHRS11Q6UWP2 260 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 Q6ZWC4 215 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 HSD17B13Q7Z5P4 300 aaPredicted RBP9.78□□□□□ -0.84
RPS28-204ENST00000602140 LINC00476Q8WZB0 136 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 BSCL2Q96G97 398 aaPredicted RBP9.78□□□□□ -0.84
RPS28-204ENST00000602140 ZNF2Q9BSG1 426 aaPredicted RBP9.78□□□□□ -0.84
RPS28-204ENST00000602140 DAZ1Q9NQZ3 744 aaKnown RBP9.78□□□□□ -0.84
RPS28-204ENST00000602140 NDUFA4L2Q9NRX3 87 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 NSG2Q9Y328 171 aa9.78□□□□□ -0.84
RPS28-204ENST00000602140 IGHV3OR16-8A0A075B7F1 116 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 SPRY2O43597 315 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 PGLYRP1O75594 196 aaPredicted RBP9.77□□□□□ -0.85
RPS28-204ENST00000602140 KRASP01116 189 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 PMP2P02689 132 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 LPAR6P43657 344 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 EWSR1Q01844 656 aaKnown RBP eCLIP9.77□□□□□ -0.85
RPS28-204ENST00000602140 DEFB135Q30KP9 77 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 LAMTOR1Q6IAA8 161 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 SPSB3Q6PJ21 355 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 WFDC3Q8IUB2 231 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 UBAC2Q8NBM4 344 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 SCARB1Q8WTV0 552 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 FCAMRQ8WWV6 532 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 LSM10Q969L4 123 aaKnown RBP9.77□□□□□ -0.85
RPS28-204ENST00000602140 MOB3AQ96BX8 217 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 S100A16Q96FQ6 103 aaKnown RBP9.77□□□□□ -0.85
RPS28-204ENST00000602140 CHRDL1Q9BU40 450 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 C20orf24Q9BUV8 137 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 C21orf62Q9NYP8 219 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 TP53TG1Q9Y2A0 90 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 OR51B2Q9Y5P1 312 aa9.77□□□□□ -0.85
RPS28-204ENST00000602140 F11RQ9Y624 299 aaKnown RBP9.77□□□□□ -0.85
RPS28-204ENST00000602140 F8W735 103 aaPredicted RBP9.76□□□□□ -0.85
RPS28-204ENST00000602140 NDUFA4O00483 81 aa9.76□□□□□ -0.85
RPS28-204ENST00000602140 ZNF207O43670 478 aaKnown RBP9.76□□□□□ -0.85
RPS28-204ENST00000602140 TMEM127O75204 238 aa9.76□□□□□ -0.85
RPS28-204ENST00000602140 SNAPC5O75971 98 aa9.76□□□□□ -0.85
RPS28-204ENST00000602140 LY6G6CO95867 125 aa9.76□□□□□ -0.85
RPS28-204ENST00000602140 BMI1P35226 326 aa9.76□□□□□ -0.85
RPS28-204ENST00000602140 ADMP35318 185 aa9.76□□□□□ -0.85
RPS28-204ENST00000602140 G6PCP35575 357 aa9.76□□□□□ -0.85
RPS28-204ENST00000602140 TNFRSF9Q07011 255 aa9.76□□□□□ -0.85
RPS28-204ENST00000602140 ODF3L2Q3SX64 289 aa9.76□□□□□ -0.85
RPS28-204ENST00000602140 LYG2Q86SG7 212 aa9.76□□□□□ -0.85
RPS28-204ENST00000602140 TSPAN14Q8NG11 270 aa9.76□□□□□ -0.85
RPS28-204ENST00000602140 DGCR14Q96DF8 476 aaKnown RBP9.76□□□□□ -0.85
RPS28-204ENST00000602140 NUPR2A6NF83 97 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 K7EIM0 57 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 K7EMT4 169 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 UBE2CO00762 179 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 RPL35AP18077 110 aaKnown RBP9.75□□□□□ -0.85
RPS28-204ENST00000602140 TGFBR1P36897 503 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 Q56UQ5 140 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 UBE2NLQ5JXB2 153 aa9.75□□□□□ -0.85
RPS28-204ENST00000602140 TMEM69Q5SWH9 247 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms