RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 ZNF767PQ75MW2 155 aa11.57□□□□□ -0.56
SSBP4-211ENST00000601614 NR2C2APQ86WQ0 139 aa11.57□□□□□ -0.56
SSBP4-211ENST00000601614 PLCXD1Q9NUJ7 323 aa11.57□□□□□ -0.56
SSBP4-211ENST00000601614 THYN1Q9P016 225 aa11.57□□□□□ -0.56
SSBP4-211ENST00000601614 RAB22AQ9UL26 194 aa11.57□□□□□ -0.56
SSBP4-211ENST00000601614 CELA1Q9UNI1 258 aa11.57□□□□□ -0.56
SSBP4-211ENST00000601614 IGHV3OR16-13A0A075B7E8 117 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 IGHV3-74A0A0B4J1X5 117 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 IGHV7-4-1A0A0J9YVY3 117 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 C15orf62A8K5M9 175 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 MRPS14O60783 128 aaKnown RBP11.56□□□□□ -0.56
SSBP4-211ENST00000601614 HRASP01112 189 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 WT1-ASQ06250 92 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 LIPKQ5VXJ0 399 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 SPSB3Q6PJ21 355 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 Q6ZR54 194 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 FAM24BQ8N5W8 94 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 GDPD1Q8N9F7 314 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 BPIFB6Q8NFQ5 453 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 SCARB1Q8WTV0 552 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 HRASLSQ9HDD0 168 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 X6R8D5 127 aa11.56□□□□□ -0.56
SSBP4-211ENST00000601614 IGLV2-18A0A075B6J9 118 aa11.55□□□□□ -0.56
SSBP4-211ENST00000601614 UPK2O00526 184 aa11.55□□□□□ -0.56
SSBP4-211ENST00000601614 P0DMU3 169 aa11.55□□□□□ -0.56
SSBP4-211ENST00000601614 FAM231AP0DMU4 169 aa11.55□□□□□ -0.56
SSBP4-211ENST00000601614 FAM231CP0DMU5 169 aa11.55□□□□□ -0.56
SSBP4-211ENST00000601614 CMC4P56277 68 aaPredicted RBP11.55□□□□□ -0.56
SSBP4-211ENST00000601614 RPS25P62851 125 aaKnown RBP11.55□□□□□ -0.56
SSBP4-211ENST00000601614 SPHARQ15513 63 aa11.55□□□□□ -0.56
SSBP4-211ENST00000601614 SLC25A24Q6NUK1 477 aa11.55□□□□□ -0.56
SSBP4-211ENST00000601614 TMEM116Q8NCL8 245 aa11.55□□□□□ -0.56
SSBP4-211ENST00000601614 MND1Q9BWT6 205 aa11.55□□□□□ -0.56
SSBP4-211ENST00000601614 C21orf62Q9NYP8 219 aa11.55□□□□□ -0.56
SSBP4-211ENST00000601614 V9GY05 133 aa11.55□□□□□ -0.56
SSBP4-211ENST00000601614 K7EIM0 57 aa11.54□□□□□ -0.56
SSBP4-211ENST00000601614 TNFSF12O43508 249 aa11.54□□□□□ -0.56
SSBP4-211ENST00000601614 SLC22A5O76082 557 aa11.54□□□□□ -0.56
SSBP4-211ENST00000601614 CTSGP08311 255 aa11.54□□□□□ -0.56
SSBP4-211ENST00000601614 OR13C7P0DN81 318 aa11.54□□□□□ -0.56
SSBP4-211ENST00000601614 TALDO1P37837 337 aa11.54□□□□□ -0.56
SSBP4-211ENST00000601614 DEFB131AP59861 70 aa11.54□□□□□ -0.56
SSBP4-211ENST00000601614 C12orf74Q32Q52 190 aa11.54□□□□□ -0.56
SSBP4-211ENST00000601614 ZNF773Q6PK81 442 aa11.54□□□□□ -0.56
SSBP4-211ENST00000601614 MAPKAPK5-AS1Q8N8E1 139 aa11.54□□□□□ -0.56
SSBP4-211ENST00000601614 UBAC2Q8NBM4 344 aa11.54□□□□□ -0.56
SSBP4-211ENST00000601614 SRSF8Q9BRL6 282 aaKnown RBP11.54□□□□□ -0.56
SSBP4-211ENST00000601614 DEFB131BA0A096LNP1 70 aa11.53□□□□□ -0.56
SSBP4-211ENST00000601614 ZNF705EA8MWA4 302 aaPredicted RBP11.53□□□□□ -0.56
SSBP4-211ENST00000601614 SERPINE2P07093 398 aa11.53□□□□□ -0.56
SSBP4-211ENST00000601614 MIFP14174 115 aa11.53□□□□□ -0.56
SSBP4-211ENST00000601614 C4BPBP20851 252 aa11.53□□□□□ -0.56
SSBP4-211ENST00000601614 DTYMKP23919 212 aa11.53□□□□□ -0.56
SSBP4-211ENST00000601614 GADD45AP24522 165 aa11.53□□□□□ -0.56
SSBP4-211ENST00000601614 CALRP27797 417 aaKnown RBP11.53□□□□□ -0.56
SSBP4-211ENST00000601614 SSX1Q16384 188 aa11.53□□□□□ -0.56
SSBP4-211ENST00000601614 ZNF66Q6ZN08 573 aa11.53□□□□□ -0.56
SSBP4-211ENST00000601614 LILRB2Q8N423 598 aa11.53□□□□□ -0.56
SSBP4-211ENST00000601614 OR10C1Q96KK4 312 aa11.53□□□□□ -0.56
SSBP4-211ENST00000601614 CENPOQ9BU64 300 aa11.53□□□□□ -0.56
SSBP4-211ENST00000601614 QTRT1Q9BXR0 403 aaKnown RBP11.53□□□□□ -0.56
SSBP4-211ENST00000601614 COMMD5Q9GZQ3 224 aa11.53□□□□□ -0.56
SSBP4-211ENST00000601614 APOBP04114 4563 aaKnown RBP11.53□□□□□ -0.56
SSBP4-211ENST00000601614 NUPL2O15504 423 aaKnown RBP11.52□□□□□ -0.57
SSBP4-211ENST00000601614 CDK2AP2O75956 126 aa11.52□□□□□ -0.57
SSBP4-211ENST00000601614 OR10A3P58181 314 aa11.52□□□□□ -0.57
SSBP4-211ENST00000601614 POU2AF1Q16633 256 aa11.52□□□□□ -0.57
SSBP4-211ENST00000601614 Q56UQ5 140 aa11.52□□□□□ -0.57
SSBP4-211ENST00000601614 TCF24Q7RTU0 167 aa11.52□□□□□ -0.57
SSBP4-211ENST00000601614 SPAG16Q8N0X2 631 aa11.52□□□□□ -0.57
SSBP4-211ENST00000601614 DHRSXQ8N5I4 330 aa11.52□□□□□ -0.57
SSBP4-211ENST00000601614 GIMAP1Q8WWP7 306 aa11.52□□□□□ -0.57
SSBP4-211ENST00000601614 ATP6V0BQ99437 205 aa11.52□□□□□ -0.57
SSBP4-211ENST00000601614 CCL28Q9NRJ3 127 aa11.52□□□□□ -0.57
SSBP4-211ENST00000601614 APOHP02749 345 aaPredicted RBP11.51□□□□□ -0.57
SSBP4-211ENST00000601614 CTXN2P0C2S0 81 aa11.51□□□□□ -0.57
SSBP4-211ENST00000601614 Q6ZRM9 215 aa11.51□□□□□ -0.57
SSBP4-211ENST00000601614 TRPT1Q86TN4 253 aaKnown RBP11.51□□□□□ -0.57
SSBP4-211ENST00000601614 C8orf59Q8N0T1 100 aaPredicted RBP11.51□□□□□ -0.57
SSBP4-211ENST00000601614 UFD1Q92890 307 aa11.51□□□□□ -0.57
SSBP4-211ENST00000601614 TMEM140Q9NV12 185 aa11.51□□□□□ -0.57
SSBP4-211ENST00000601614 F11RQ9Y624 299 aaKnown RBP11.51□□□□□ -0.57
SSBP4-211ENST00000601614 TEX50A0A1B0GTY4 177 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 SULT1C2O00338 296 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 ARL6IP5O75915 188 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 CD74P04233 296 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 RAB6AP20340 208 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 TAS2R31P59538 309 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 FABP5Q01469 135 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 CNIH2Q6PI25 160 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 NUDCD2Q8WVJ2 157 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 ST8SIA2Q92186 375 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 NDUFAF3Q9BU61 184 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 MS4A6AQ9H2W1 248 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 CLEC5AQ9NY25 188 aa11.5□□□□□ -0.57
SSBP4-211ENST00000601614 RBFOX2O43251 390 aaKnown RBP eCLIP11.49□□□□□ -0.574e-7■■■■□ 22.9
SSBP4-211ENST00000601614 YIF1AO95070 293 aa11.49□□□□□ -0.57
SSBP4-211ENST00000601614 TRAPPC2P0DI81 140 aa11.49□□□□□ -0.57
SSBP4-211ENST00000601614 TRAPPC2BP0DI82 140 aa11.49□□□□□ -0.57
SSBP4-211ENST00000601614 CDNFQ49AH0 187 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms