RNA–Protein interactions for RNA: ENST00000601252.1

TIMM50-215, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 5

Gene TIMM50, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-215	ENST00000601252	CXorf1	O96002	111 aa		11.66	□□□□□ -0.54
TIMM50-215	ENST00000601252	CD99	P14209	185 aa		11.66	□□□□□ -0.54
TIMM50-215	ENST00000601252	HOXA5	P20719	270 aa		11.66	□□□□□ -0.54
TIMM50-215	ENST00000601252	RPL31	P62899	125 aa	Known RBP	11.66	□□□□□ -0.54
TIMM50-215	ENST00000601252	SPINK9	Q5DT21	86 aa		11.66	□□□□□ -0.54
TIMM50-215	ENST00000601252	OR4A47	Q6IF82	309 aa		11.66	□□□□□ -0.54
TIMM50-215	ENST00000601252	TEPP	Q6URK8	271 aa		11.66	□□□□□ -0.54
TIMM50-215	ENST00000601252	ZNF714	Q96N38	554 aa		11.66	□□□□□ -0.54
TIMM50-215	ENST00000601252	URGCP-MRPS24	S4R325	110 aa		11.66	□□□□□ -0.54
TIMM50-215	ENST00000601252	CFAP46	Q8IYW2	2715 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252		H7BYZ3	331 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	TNFRSF13B	O14836	293 aa	Predicted RBP	11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	PPP1R2P9	O14990	202 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	NDUFB3	O43676	98 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	APOA2	P02652	100 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	CXCL1	P09341	107 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	BTF3	P20290	206 aa	Known RBP	11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	GRN	P28799	593 aa	Known RBP	11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	S100A2	P29034	98 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	CDX1	P47902	265 aa	Predicted RBP	11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	ZNF672	Q499Z4	452 aa	Predicted RBP	11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	MUC15	Q8N387	334 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	OR5B3	Q8NH48	314 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	OSR1	Q8TAX0	266 aa	Predicted RBP	11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	RPUSD4	Q96CM3	377 aa	Known RBP	11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	SSX3	Q99909	188 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	PXMP4	Q9Y6I8	212 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	ARL2-SNX15	V9GYD0	113 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	FAM208B	Q5VWN6	2430 aa		11.65	□□□□□ -0.54
TIMM50-215	ENST00000601252	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252		A0A1W2PPE3	182 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	PAGE4	O60829	102 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	FSTL3	O95633	263 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	PLAU	P00749	431 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	RHOB	P62745	196 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	ZNF343	Q6P1L6	599 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	KCNIP4	Q6PIL6	250 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	C8orf31	Q8N9H6	132 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	GGTLC1	Q9BX51	225 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	PLEKHA3	Q9HB20	300 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	SLC35D1	Q9NTN3	355 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	BET1L	Q9NYM9	111 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	DOK5	Q9P104	306 aa		11.64	□□□□□ -0.55
TIMM50-215	ENST00000601252	SIAH2	O43255	324 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	STAG3L2	P0CL84	134 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	STAG3L3	P0CL85	134 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	SRP14	P37108	136 aa	Known RBP	11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	RPL29	P47914	159 aa	Known RBP	11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	PPOX	P50336	477 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	LINC00205	P59089	165 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	RPL23	P62829	140 aa	Known RBP	11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	PRCD	Q00LT1	54 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	SSX2	Q16385	188 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252		Q8N7P7	452 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	ZNF383	Q8NA42	475 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	LEAP2	Q969E1	77 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	C19orf24	Q9BVV8	132 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	SRD5A3	Q9H8P0	318 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	LSM4	Q9Y4Z0	139 aa	Known RBP	11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	OR51B2	Q9Y5P1	312 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	RRH	O14718	337 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	CLN5	O75503	358 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	IGHV3-7	P01780	117 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	LOX	P28300	417 aa	Predicted RBP	11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	GNG10	P50151	68 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	OR4A5	Q8NH83	315 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	VSTM2A	Q8TAG5	236 aa		11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	GAR1	Q9NY12	217 aa	Known RBP	11.63	□□□□□ -0.55
TIMM50-215	ENST00000601252	PPP5D1	E7EU14	171 aa		11.62	□□□□□ -0.55
TIMM50-215	ENST00000601252		J3QR06	171 aa		11.62	□□□□□ -0.55
TIMM50-215	ENST00000601252	UPK2	O00526	184 aa		11.62	□□□□□ -0.55
TIMM50-215	ENST00000601252	IL6R	P08887	468 aa	Predicted RBP	11.62	□□□□□ -0.55
TIMM50-215	ENST00000601252	FAM3B	P58499	235 aa	Predicted RBP	11.62	□□□□□ -0.55
TIMM50-215	ENST00000601252	LY6D	Q14210	128 aa		11.62	□□□□□ -0.55
TIMM50-215	ENST00000601252	ZNF833P	Q6ZTB9	187 aa		11.62	□□□□□ -0.55
TIMM50-215	ENST00000601252	VKORC1L1	Q8N0U8	176 aa		11.62	□□□□□ -0.55
TIMM50-215	ENST00000601252	SLC35E1	Q96K37	410 aa		11.62	□□□□□ -0.55
TIMM50-215	ENST00000601252	IMMP2L	Q96T52	175 aa		11.62	□□□□□ -0.55
TIMM50-215	ENST00000601252	MGST2	Q99735	147 aa		11.62	□□□□□ -0.55
TIMM50-215	ENST00000601252	PYGO2	Q9BRQ0	406 aa		11.62	□□□□□ -0.55
TIMM50-215	ENST00000601252	TRBV23-1	A0A0A0MS06	115 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	HMGB3	O15347	200 aa	Known RBP	11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	HIST1H2BK	O60814	126 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	FCN3	O75636	299 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	MMP23A	O75900	390 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	HIST1H2BJ	P06899	126 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	HIST1H2BO	P23527	126 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	HIST1H2BB	P33778	126 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	GALR1	P47211	349 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	NDUFA6	P56556	154 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	HIST1H2BD	P58876	126 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	HIST1H2BC	P62807	126 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	CDSN	Q15517	529 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	HIST2H2BE	Q16778	126 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	FAM209B	Q5JX69	171 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	UTF1	Q5T230	341 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	SPNS3	Q6ZMD2	512 aa		11.61	□□□□□ -0.55
TIMM50-215	ENST00000601252	C16orf82	Q7Z2V1	217 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms