RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 SAMD12Q8N8I0 201 aa12.79□□□□□ -0.36
SMG9-210ENST00000600097 ZNF502Q8TBZ5 544 aa12.79□□□□□ -0.36
SMG9-210ENST00000600097 C5orf66Q9H5L9 145 aa12.79□□□□□ -0.36
SMG9-210ENST00000600097 ANXA10Q9UJ72 324 aa12.79□□□□□ -0.36
SMG9-210ENST00000600097 TRAV18A0A075B6X5 111 aa12.78□□□□□ -0.36
SMG9-210ENST00000600097 KIR2DL5BA0A0G2JN68 375 aa12.78□□□□□ -0.36
SMG9-210ENST00000600097 KIR2DL5BA0A0G2JPC4 375 aa12.78□□□□□ -0.36
SMG9-210ENST00000600097 ZNF182P17025 639 aaPredicted RBP12.78□□□□□ -0.36
SMG9-210ENST00000600097 GPR183P32249 361 aa12.78□□□□□ -0.36
SMG9-210ENST00000600097 MSMO1Q15800 293 aa12.78□□□□□ -0.36
SMG9-210ENST00000600097 KIR2DL5AQ8N109 375 aa12.78□□□□□ -0.36
SMG9-210ENST00000600097 TMEM217Q8N7C4 229 aa12.78□□□□□ -0.36
SMG9-210ENST00000600097 KIR2DL5BQ8NHK3 375 aa12.78□□□□□ -0.36
SMG9-210ENST00000600097 NUDCD2Q8WVJ2 157 aa12.78□□□□□ -0.36
SMG9-210ENST00000600097 SRSF8Q9BRL6 282 aaKnown RBP12.78□□□□□ -0.36
SMG9-210ENST00000600097 HRASLSQ9HDD0 168 aa12.78□□□□□ -0.36
SMG9-210ENST00000600097 SMIM31A0A1B0GVY4 71 aa12.77□□□□□ -0.37
SMG9-210ENST00000600097 TMEM235A6NFC5 223 aa12.77□□□□□ -0.37
SMG9-210ENST00000600097 CGB1A6NKQ9 187 aa12.77□□□□□ -0.37
SMG9-210ENST00000600097 TSPAN4O14817 238 aa12.77□□□□□ -0.37
SMG9-210ENST00000600097 RBFOX2O43251 390 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMG9-210ENST00000600097 XRCC3O43542 346 aa12.77□□□□□ -0.37
SMG9-210ENST00000600097 PTBP1P26599 531 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMG9-210ENST00000600097 OR2B8PP59922 312 aa12.77□□□□□ -0.37
SMG9-210ENST00000600097 EWSR1Q01844 656 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMG9-210ENST00000600097 DEFB135Q30KP9 77 aa12.77□□□□□ -0.37
SMG9-210ENST00000600097 STPG3Q8N7X2 389 aa12.77□□□□□ -0.37
SMG9-210ENST00000600097 COMMD3Q9UBI1 195 aa12.77□□□□□ -0.37
SMG9-210ENST00000600097 IGLC7A0M8Q6 106 aa12.76□□□□□ -0.37
SMG9-210ENST00000600097 CYB5BO43169 146 aa12.76□□□□□ -0.37
SMG9-210ENST00000600097 APOA1P02647 267 aa12.76□□□□□ -0.37
SMG9-210ENST00000600097 TMEM69Q5SWH9 247 aa12.76□□□□□ -0.37
SMG9-210ENST00000600097 LAMTOR1Q6IAA8 161 aa12.76□□□□□ -0.37
SMG9-210ENST00000600097 SPAG16Q8N0X2 631 aa12.76□□□□□ -0.37
SMG9-210ENST00000600097 ZBTB34Q8NCN2 500 aa12.76□□□□□ -0.37
SMG9-210ENST00000600097 VN1R17PQ8TDU5 208 aa12.76□□□□□ -0.37
SMG9-210ENST00000600097 TMEM190Q8WZ59 177 aa12.76□□□□□ -0.37
SMG9-210ENST00000600097 RNF183Q96D59 192 aa12.76□□□□□ -0.37
SMG9-210ENST00000600097 ZNF436Q9C0F3 470 aaPredicted RBP12.76□□□□□ -0.37
SMG9-210ENST00000600097 COMMD5Q9GZQ3 224 aa12.76□□□□□ -0.37
SMG9-210ENST00000600097 DAZ1Q9NQZ3 744 aaKnown RBP12.76□□□□□ -0.37
SMG9-210ENST00000600097 IGHV3-35A0A0C4DH35 117 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 TGOLN2O43493 480 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 SSX5O60225 188 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 FGF2P09038 288 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 CBX5P45973 191 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 TAS2R31P59538 309 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 ARPC4P59998 168 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 CATR1Q13166 79 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 POU2AF1Q16633 256 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 SECTM1Q8WVN6 248 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 GPHA2Q96T91 129 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 CCL28Q9NRJ3 127 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 UBQLN2Q9UHD9 624 aa12.75□□□□□ -0.37
SMG9-210ENST00000600097 TNFSF12O43508 249 aa12.74□□□□□ -0.37
SMG9-210ENST00000600097 HPRT1P00492 218 aa12.74□□□□□ -0.37
SMG9-210ENST00000600097 NQO2P16083 231 aa12.74□□□□□ -0.37
SMG9-210ENST00000600097 FCGR2CP31995 323 aa12.74□□□□□ -0.37
SMG9-210ENST00000600097 SPCS2Q15005 226 aa12.74□□□□□ -0.37
SMG9-210ENST00000600097 THOC7Q6I9Y2 204 aaKnown RBP12.74□□□□□ -0.37
SMG9-210ENST00000600097 KRTAP17-1Q9BYP8 105 aa12.74□□□□□ -0.37
SMG9-210ENST00000600097 AUNIPQ9H7T9 357 aa12.74□□□□□ -0.37
SMG9-210ENST00000600097 CCDC160A6NGH7 325 aa12.73□□□□□ -0.37
SMG9-210ENST00000600097 OR4C46A6NHA9 309 aa12.73□□□□□ -0.37
SMG9-210ENST00000600097 UPK2O00526 184 aa12.73□□□□□ -0.37
SMG9-210ENST00000600097 ODF3L2Q3SX64 289 aa12.73□□□□□ -0.37
SMG9-210ENST00000600097 SPSB3Q6PJ21 355 aa12.73□□□□□ -0.37
SMG9-210ENST00000600097 HSD17B13Q7Z5P4 300 aaPredicted RBP12.73□□□□□ -0.37
SMG9-210ENST00000600097 GDPD1Q8N9F7 314 aa12.73□□□□□ -0.37
SMG9-210ENST00000600097 BEST4Q8NFU0 473 aa12.73□□□□□ -0.37
SMG9-210ENST00000600097 CD300LFQ8TDQ1 290 aa12.73□□□□□ -0.37
SMG9-210ENST00000600097 GALNT14Q96FL9 552 aa12.73□□□□□ -0.37
SMG9-210ENST00000600097 BSCL2Q96G97 398 aaPredicted RBP12.73□□□□□ -0.37
SMG9-210ENST00000600097 ATP6V0BQ99437 205 aa12.73□□□□□ -0.37
SMG9-210ENST00000600097 QTRT1Q9BXR0 403 aaKnown RBP12.73□□□□□ -0.37
SMG9-210ENST00000600097 FAM25AB3EWG3 89 aa12.72□□□□□ -0.37
SMG9-210ENST00000600097 FAM25CB3EWG5 89 aa12.72□□□□□ -0.37
SMG9-210ENST00000600097 FAM25GB3EWG6 89 aa12.72□□□□□ -0.37
SMG9-210ENST00000600097 SULT1C2O00338 296 aa12.72□□□□□ -0.37
SMG9-210ENST00000600097 NDUFA4O00483 81 aa12.72□□□□□ -0.37
SMG9-210ENST00000600097 HPGDSO60760 199 aa12.72□□□□□ -0.37
SMG9-210ENST00000600097 PPYP01298 95 aa12.72□□□□□ -0.37
SMG9-210ENST00000600097 EIF4EP06730 217 aaKnown RBP12.72□□□□□ -0.37
SMG9-210ENST00000600097 TAS2R20P59543 309 aa12.72□□□□□ -0.37
SMG9-210ENST00000600097 RPP25LQ8N5L8 163 aaKnown RBP12.72□□□□□ -0.37
SMG9-210ENST00000600097 C6orf62Q9GZU0 229 aaPredicted RBP12.72□□□□□ -0.37
SMG9-210ENST00000600097 SLC5A7Q9GZV3 580 aa12.72□□□□□ -0.37
SMG9-210ENST00000600097 PLEKHA2Q9HB19 425 aa12.72□□□□□ -0.37
SMG9-210ENST00000600097 CCDC59Q9P031 241 aaKnown RBP12.72□□□□□ -0.37
SMG9-210ENST00000600097 TRAV3A0A0B4J244 114 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 OR2T8A6NH00 312 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 H3BMQ9 156 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 SERPINE2P07093 398 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 RPA2P15927 270 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 ELK1P19419 428 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 PRSS3P35030 304 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 LGALS9CQ6DKI2 356 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 HOGA1Q86XE5 327 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 DMBX1Q8NFW5 382 aa12.71□□□□□ -0.37
SMG9-210ENST00000600097 DYNC2LI1Q8TCX1 351 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms