RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 HPRT1P00492 218 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 HRASP01112 189 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 F2RP25116 425 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 PIGPP57054 158 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 ZNF45Q02386 682 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 OR4A47Q6IF82 309 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 SLC25A42Q86VD7 318 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 TOMM5Q8N4H5 51 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 TTC9CQ8N5M4 171 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 NECAP1Q8NC96 275 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 DMBX1Q8NFW5 382 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 VSTM2AQ8TAG5 236 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 OR2A7Q96R45 310 aa14.24□□□□□ -0.13
PNKP-213ENST00000599543 SDHCQ99643 169 aaPredicted RBP14.24□□□□□ -0.13
PNKP-213ENST00000599543 BMPR1BO00238 502 aa14.23□□□□□ -0.13
PNKP-213ENST00000599543 RBFOX2O43251 390 aaKnown RBP eCLIP14.23□□□□□ -0.13
PNKP-213ENST00000599543 KRASP01116 189 aa14.23□□□□□ -0.13
PNKP-213ENST00000599543 PTBP1P26599 531 aaKnown RBP eCLIP14.23□□□□□ -0.13
PNKP-213ENST00000599543 S100GP29377 79 aa14.23□□□□□ -0.13
PNKP-213ENST00000599543 G6PCP35575 357 aa14.23□□□□□ -0.13
PNKP-213ENST00000599543 SP6Q3SY56 376 aa14.23□□□□□ -0.13
PNKP-213ENST00000599543 ZNF57Q68EA5 555 aaPredicted RBP14.23□□□□□ -0.13
PNKP-213ENST00000599543 TP53RKQ96S44 253 aa14.23□□□□□ -0.13
PNKP-213ENST00000599543 SPATA25Q9BR10 227 aa14.23□□□□□ -0.13
PNKP-213ENST00000599543 TUBA4BQ9H853 241 aa14.23□□□□□ -0.13
PNKP-213ENST00000599543 TMEM140Q9NV12 185 aa14.23□□□□□ -0.13
PNKP-213ENST00000599543 TENM2Q9NT68 2774 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.22□□□□□ -0.13
PNKP-213ENST00000599543 HMX3A6NHT5 357 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 E7EUB6 86 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 IGKV1-39P01597 117 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 IGKV1D-39P04432 117 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 NQO2P16083 231 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 TAS2R31P59538 309 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 C15orf32Q32M92 178 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 FAM209BQ5JX69 171 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 C19orf35Q6ZS72 473 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 OR2K2Q8NGT1 345 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 TMEM167AQ8TBQ9 72 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 ZFAND1Q8TCF1 268 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 RTBDNQ9BSG5 229 aaPredicted RBP14.22□□□□□ -0.13
PNKP-213ENST00000599543 PLEKHA2Q9HB19 425 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 ZNF257Q9Y2Q1 563 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 NSG2Q9Y328 171 aa14.22□□□□□ -0.13
PNKP-213ENST00000599543 DYNC2H1Q8NCM8 4307 aaKnown RBP14.21□□□□□ -0.13
PNKP-213ENST00000599543 IZUMO1RA6ND01 250 aa14.21□□□□□ -0.13
PNKP-213ENST00000599543 OR2J3O76001 311 aa14.21□□□□□ -0.13
PNKP-213ENST00000599543 CTSDP07339 412 aaPredicted RBP14.21□□□□□ -0.13
PNKP-213ENST00000599543 RND3P61587 244 aa14.21□□□□□ -0.13
PNKP-213ENST00000599543 CD300LFQ8TDQ1 290 aa14.21□□□□□ -0.13
PNKP-213ENST00000599543 FYTTD1Q96QD9 318 aaKnown RBP14.21□□□□□ -0.13
PNKP-213ENST00000599543 PRRT1Q99946 306 aa14.21□□□□□ -0.13
PNKP-213ENST00000599543 COMMD9Q9P000 198 aa14.21□□□□□ -0.13
PNKP-213ENST00000599543 COPZ2Q9P299 210 aa14.21□□□□□ -0.13
PNKP-213ENST00000599543 C14orf166Q9Y224 244 aaKnown RBP14.21□□□□□ -0.13
PNKP-213ENST00000599543 A0A1B0GW64 132 aa14.2□□□□□ -0.14
PNKP-213ENST00000599543 UPK2O00526 184 aa14.2□□□□□ -0.14
PNKP-213ENST00000599543 RPL27AP46776 148 aaKnown RBP14.2□□□□□ -0.14
PNKP-213ENST00000599543 ERVK-16P61578 105 aa14.2□□□□□ -0.14
PNKP-213ENST00000599543 HAGHQ16775 308 aa14.2□□□□□ -0.14
PNKP-213ENST00000599543 IZUMO4Q1ZYL8 232 aa14.2□□□□□ -0.14
PNKP-213ENST00000599543 TRIQKQ629K1 86 aa14.2□□□□□ -0.14
PNKP-213ENST00000599543 DYNLRB2Q8TF09 96 aa14.2□□□□□ -0.14
PNKP-213ENST00000599543 ZNF486Q96H40 463 aaPredicted RBP14.2□□□□□ -0.14
PNKP-213ENST00000599543 C5orf66Q9H5L9 145 aa14.2□□□□□ -0.14
PNKP-213ENST00000599543 LYSTQ99698 3801 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 C3orf85A0A1B0GTC6 90 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 MARCH11A6NNE9 402 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 NPIPB5A8MRT5 1133 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 TEX22C9J3V5 150 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 PPP5D1E7EU14 171 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 IL6RP08887 468 aaPredicted RBP14.19□□□□□ -0.14
PNKP-213ENST00000599543 HLA-GP17693 338 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 MAS1LP35410 378 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 INPP1P49441 399 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 AP3S2P59780 193 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 OR2B8PP59922 312 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 RPL8P62917 257 aaKnown RBP14.19□□□□□ -0.14
PNKP-213ENST00000599543 POU2AF1Q16633 256 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 CD300EQ496F6 205 aaPredicted RBP14.19□□□□□ -0.14
PNKP-213ENST00000599543 GDPD1Q8N9F7 314 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 CCDC71LQ8N9Z2 235 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 EDA2RQ9HAV5 297 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 SLC2A8Q9NY64 477 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 BET1LQ9NYM9 111 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 PRR13Q9NZ81 148 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 SCP2D1Q9UJQ7 156 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 FBXL7Q9UJT9 491 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 GPR132Q9UNW8 380 aa14.19□□□□□ -0.14
PNKP-213ENST00000599543 STARD9Q9P2P6 4700 aa14.18□□□□□ -0.14
PNKP-213ENST00000599543 TEX13DA0A0J9YY54 714 aaPredicted RBP14.18□□□□□ -0.14
PNKP-213ENST00000599543 CGB1A6NKQ9 187 aa14.18□□□□□ -0.14
PNKP-213ENST00000599543 DHFRP00374 187 aa14.18□□□□□ -0.14
PNKP-213ENST00000599543 REG1AP05451 166 aa14.18□□□□□ -0.14
PNKP-213ENST00000599543 SERPINE2P07093 398 aa14.18□□□□□ -0.14
PNKP-213ENST00000599543 FAUP35544 74 aaKnown RBP14.18□□□□□ -0.14
PNKP-213ENST00000599543 MECP2P51608 486 aaKnown RBP14.18□□□□□ -0.14
PNKP-213ENST00000599543 CD81P60033 236 aa14.18□□□□□ -0.14
PNKP-213ENST00000599543 ZFAND6Q6FIF0 208 aa14.18□□□□□ -0.14
PNKP-213ENST00000599543 TMEM230Q96A57 120 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms