RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 SLC2A8Q9NY64 477 aa17.4■□□□□ 0.38
SSBP4-205ENST00000598159 FKBP11Q9NYL4 201 aa17.4■□□□□ 0.38
SSBP4-205ENST00000598159 ZNF320A2RRD8 509 aa17.39■□□□□ 0.37
SSBP4-205ENST00000598159 MFSD2BA6NFX1 497 aa17.39■□□□□ 0.37
SSBP4-205ENST00000598159 FAM25AB3EWG3 89 aa17.39■□□□□ 0.37
SSBP4-205ENST00000598159 FAM25CB3EWG5 89 aa17.39■□□□□ 0.37
SSBP4-205ENST00000598159 FAM25GB3EWG6 89 aa17.39■□□□□ 0.37
SSBP4-205ENST00000598159 OR13C7P0DN81 318 aa17.39■□□□□ 0.37
SSBP4-205ENST00000598159 ZNF182P17025 639 aaPredicted RBP17.39■□□□□ 0.37
SSBP4-205ENST00000598159 G6PCP35575 357 aa17.39■□□□□ 0.37
SSBP4-205ENST00000598159 CTF1Q16619 201 aa17.39■□□□□ 0.37
SSBP4-205ENST00000598159 MUC7Q8TAX7 377 aa17.39■□□□□ 0.37
SSBP4-205ENST00000598159 ZNF502Q8TBZ5 544 aa17.39■□□□□ 0.37
SSBP4-205ENST00000598159 VN1R17PQ8TDU5 208 aa17.39■□□□□ 0.37
SSBP4-205ENST00000598159 GABARAPO95166 117 aa17.38■□□□□ 0.37
SSBP4-205ENST00000598159 PHLDA2Q53GA4 152 aa17.38■□□□□ 0.37
SSBP4-205ENST00000598159 SLC25A24Q6NUK1 477 aa17.38■□□□□ 0.37
SSBP4-205ENST00000598159 GDPD1Q8N9F7 314 aa17.38■□□□□ 0.37
SSBP4-205ENST00000598159 TSC22D3Q99576 134 aa17.38■□□□□ 0.37
SSBP4-205ENST00000598159 NEURL2Q9BR09 285 aa17.38■□□□□ 0.37
SSBP4-205ENST00000598159 NAA50Q9GZZ1 169 aaKnown RBP17.38■□□□□ 0.37
SSBP4-205ENST00000598159 ZC4H2Q9NQZ6 224 aa17.38■□□□□ 0.37
SSBP4-205ENST00000598159 PRNDQ9UKY0 176 aa17.38■□□□□ 0.37
SSBP4-205ENST00000598159 OR51B2Q9Y5P1 312 aa17.38■□□□□ 0.37
SSBP4-205ENST00000598159 A8MWP6 167 aa17.37■□□□□ 0.37
SSBP4-205ENST00000598159 TPPPO94811 219 aa17.37■□□□□ 0.37
SSBP4-205ENST00000598159 CD81P60033 236 aa17.37■□□□□ 0.37
SSBP4-205ENST00000598159 WT1-ASQ06250 92 aa17.37■□□□□ 0.37
SSBP4-205ENST00000598159 HAGHQ16775 308 aa17.37■□□□□ 0.37
SSBP4-205ENST00000598159 PLET1Q6UQ28 207 aa17.37■□□□□ 0.37
SSBP4-205ENST00000598159 SLC38A6Q8IZM9 456 aa17.37■□□□□ 0.37
SSBP4-205ENST00000598159 LSM10Q969L4 123 aaKnown RBP17.37■□□□□ 0.37
SSBP4-205ENST00000598159 CITED4Q96RK1 184 aa17.37■□□□□ 0.37
SSBP4-205ENST00000598159 SPATA25Q9BR10 227 aa17.37■□□□□ 0.37
SSBP4-205ENST00000598159 PALMDQ9NP74 551 aa17.37■□□□□ 0.37
SSBP4-205ENST00000598159 NSG2Q9Y328 171 aa17.37■□□□□ 0.37
SSBP4-205ENST00000598159 SMIM18P0DKX4 95 aa17.36■□□□□ 0.37
SSBP4-205ENST00000598159 EDN2P20800 178 aa17.36■□□□□ 0.37
SSBP4-205ENST00000598159 GPR107Q5VW38 600 aa17.36■□□□□ 0.37
SSBP4-205ENST00000598159 TBC1D26Q86UD7 250 aa17.36■□□□□ 0.37
SSBP4-205ENST00000598159 OR1L6Q8NGR2 347 aa17.36■□□□□ 0.37
SSBP4-205ENST00000598159 OR5B3Q8NH48 314 aa17.36■□□□□ 0.37
SSBP4-205ENST00000598159 C15orf40Q8WUR7 153 aa17.36■□□□□ 0.37
SSBP4-205ENST00000598159 TMEM56Q96MV1 263 aa17.36■□□□□ 0.37
SSBP4-205ENST00000598159 HINT2Q9BX68 163 aa17.36■□□□□ 0.37
SSBP4-205ENST00000598159 IFNA6P05013 189 aa17.35■□□□□ 0.37
SSBP4-205ENST00000598159 GPR183P32249 361 aa17.35■□□□□ 0.37
SSBP4-205ENST00000598159 GUCA2BQ16661 112 aa17.35■□□□□ 0.37
SSBP4-205ENST00000598159 ZNF57Q68EA5 555 aaPredicted RBP17.35■□□□□ 0.37
SSBP4-205ENST00000598159 UXS1Q8NBZ7 420 aa17.35■□□□□ 0.37
SSBP4-205ENST00000598159 MARC2Q969Z3 335 aa17.35■□□□□ 0.37
SSBP4-205ENST00000598159 ATP6V0BQ99437 205 aa17.35■□□□□ 0.37
SSBP4-205ENST00000598159 KLK11Q9UBX7 282 aa17.35■□□□□ 0.37
SSBP4-205ENST00000598159 F11RQ9Y624 299 aaKnown RBP17.35■□□□□ 0.37
SSBP4-205ENST00000598159 STAB2Q8WWQ8 2551 aa17.35■□□□□ 0.37
SSBP4-205ENST00000598159 TMEM213A2RRL7 107 aa17.34■□□□□ 0.37
SSBP4-205ENST00000598159 CD7P09564 240 aa17.34■□□□□ 0.37
SSBP4-205ENST00000598159 ELLP55199 621 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-205ENST00000598159 LINC00322Q6ZN03 302 aaPredicted RBP17.34■□□□□ 0.37
SSBP4-205ENST00000598159 TMEM14BQ9NUH8 114 aa17.34■□□□□ 0.37
SSBP4-205ENST00000598159 EXTL2Q9UBQ6 330 aa17.34■□□□□ 0.37
SSBP4-205ENST00000598159 M0QYG6 137 aa17.33■□□□□ 0.36
SSBP4-205ENST00000598159 CASC10Q5T4H9 136 aa17.33■□□□□ 0.36
SSBP4-205ENST00000598159 H2BFWTQ7Z2G1 175 aa17.33■□□□□ 0.36
SSBP4-205ENST00000598159 CACNG8Q8WXS5 425 aa17.33■□□□□ 0.36
SSBP4-205ENST00000598159 WDR89Q96FK6 387 aaPredicted RBP17.33■□□□□ 0.36
SSBP4-205ENST00000598159 SEC22AQ96IW7 307 aa17.33■□□□□ 0.36
SSBP4-205ENST00000598159 MRPS26Q9BYN8 205 aaKnown RBP17.33■□□□□ 0.36
SSBP4-205ENST00000598159 ZNF436Q9C0F3 470 aaPredicted RBP17.33■□□□□ 0.36
SSBP4-205ENST00000598159 PLEKHA3Q9HB20 300 aa17.33■□□□□ 0.36
SSBP4-205ENST00000598159 MRPL27Q9P0M9 148 aaKnown RBP17.33■□□□□ 0.36
SSBP4-205ENST00000598159 UFC1Q9Y3C8 167 aa17.33■□□□□ 0.36
SSBP4-205ENST00000598159 C15orf61A6NNL5 157 aa17.32■□□□□ 0.36
SSBP4-205ENST00000598159 TGOLN2O43493 480 aa17.32■□□□□ 0.36
SSBP4-205ENST00000598159 C8orf88P0DMB2 117 aa17.32■□□□□ 0.36
SSBP4-205ENST00000598159 TM4SF20Q53R12 229 aa17.32■□□□□ 0.36
SSBP4-205ENST00000598159 RNASE10Q5GAN6 216 aaKnown RBP17.32■□□□□ 0.36
SSBP4-205ENST00000598159 SPSB3Q6PJ21 355 aa17.32■□□□□ 0.36
SSBP4-205ENST00000598159 UNQ9165/PRO28630Q6UXU0 137 aa17.32■□□□□ 0.36
SSBP4-205ENST00000598159 BSCL2Q96G97 398 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-205ENST00000598159 ZNF486Q96H40 463 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-205ENST00000598159 MTFP1Q9UDX5 166 aa17.32■□□□□ 0.36
SSBP4-205ENST00000598159 MLXQ9UH92 298 aa17.32■□□□□ 0.36
SSBP4-205ENST00000598159 OR11H12B2RN74 326 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 LYL1P12980 280 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 TBPP20226 339 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 MFAP2P55001 183 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 RND3P61587 244 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 ANKRD55Q3KP44 614 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 SLC16A13Q7RTY0 426 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 GPR141Q7Z602 305 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 ARRDC1Q8N5I2 433 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 DEFB125Q8N687 156 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 OR52I2Q8NH67 350 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 OR4A16Q8NH70 328 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 ABHD1Q96SE0 405 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 CEPT1Q9Y6K0 416 aa17.31■□□□□ 0.36
SSBP4-205ENST00000598159 TRAV25A0A0B4J276 109 aa17.3■□□□□ 0.36
SSBP4-205ENST00000598159 OR2T8A6NH00 312 aa17.3■□□□□ 0.36
SSBP4-205ENST00000598159 IGKV1-39P01597 117 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms