RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 PRNDQ9UKY0 176 aa12.12□□□□□ -0.47
SMCO4-206ENST00000596676 IGLC7A0M8Q6 106 aa12.11□□□□□ -0.47
SMCO4-206ENST00000596676 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
SMCO4-206ENST00000596676 TRAPPC2P0DI81 140 aa12.11□□□□□ -0.47
SMCO4-206ENST00000596676 TRAPPC2BP0DI82 140 aa12.11□□□□□ -0.47
SMCO4-206ENST00000596676 SRPXP78539 464 aa12.11□□□□□ -0.47
SMCO4-206ENST00000596676 WT1-ASQ06250 92 aa12.11□□□□□ -0.47
SMCO4-206ENST00000596676 AKIRIN2Q53H80 203 aa12.11□□□□□ -0.47
SMCO4-206ENST00000596676 C12orf45Q8N5I9 185 aaPredicted RBP12.11□□□□□ -0.47
SMCO4-206ENST00000596676 C3orf56Q8N813 242 aa12.11□□□□□ -0.47
SMCO4-206ENST00000596676 COQ8AQ8NI60 647 aa12.11□□□□□ -0.47
SMCO4-206ENST00000596676 CITED2Q99967 270 aaPredicted RBP12.11□□□□□ -0.47
SMCO4-206ENST00000596676 ZNF747Q9BV97 191 aa12.11□□□□□ -0.47
SMCO4-206ENST00000596676 A0A1W2PRX2 142 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 FBXO24O75426 580 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 IGLV1-40P01703 118 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 IGHG4P01861 327 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 PF4V1P10720 104 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 HSPE1P61604 102 aaKnown RBP12.1□□□□□ -0.47
SMCO4-206ENST00000596676 TMEM267Q0VDI3 215 aaPredicted RBP12.1□□□□□ -0.47
SMCO4-206ENST00000596676 RGS21Q2M5E4 152 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 OR10C1Q96KK4 312 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 SPIN2AQ99865 258 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 CITED1Q99966 193 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 SPIN2BQ9BPZ2 258 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.1□□□□□ -0.47
SMCO4-206ENST00000596676 COA4Q9NYJ1 87 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 ZNF580Q9UK33 172 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 ANK2Q01484 3957 aa12.1□□□□□ -0.47
SMCO4-206ENST00000596676 IFNA17P01571 189 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 SULT1A3P0DMM9 295 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 SULT1A4P0DMN0 295 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 OR13C7P0DN81 318 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 PSMB8P28062 276 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 SLC35B1P78383 322 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 CD83Q01151 205 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 KIAA0141Q14154 515 aaPredicted RBP12.09□□□□□ -0.47
SMCO4-206ENST00000596676 SMCO1Q147U7 214 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 CXorf66Q5JRM2 361 aaPredicted RBP12.09□□□□□ -0.47
SMCO4-206ENST00000596676 ZNF429Q86V71 674 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 TTC9CQ8N5M4 171 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 FAM110DQ8TAY7 271 aaPredicted RBP12.09□□□□□ -0.47
SMCO4-206ENST00000596676 ZNF355PQ9NSJ1 428 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 FKBP11Q9NYL4 201 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 DMRT1Q9Y5R6 373 aa12.09□□□□□ -0.47
SMCO4-206ENST00000596676 A0A1B0GU03 582 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 DUXBA0A1W2PPF3 345 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 TCRBV4S1A1TA0A5B7 111 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 ADARB2-AS1A8MUL3 147 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 PITX3O75364 302 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 SIX6O95475 246 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 DHFRP00374 187 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 FGF2P09038 288 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 PSMB6P28072 239 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 PRCDQ00LT1 54 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 FOXE3Q13461 319 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 OXA1LQ15070 435 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 TEX38Q6PEX7 206 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 OR5B3Q8NH48 314 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 OR1S1Q8NH92 325 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 WDR89Q96FK6 387 aaPredicted RBP12.08□□□□□ -0.48
SMCO4-206ENST00000596676 ZNF257Q9Y2Q1 563 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 TMED3Q9Y3Q3 217 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 ALG5Q9Y673 324 aa12.08□□□□□ -0.48
SMCO4-206ENST00000596676 C13orf42A0A1B0GVH6 325 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 PRAF2O60831 178 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 CTRB1P17538 263 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 RAB9AP51151 201 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 MFAP2P55001 183 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 TATDN3Q17R31 274 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 NSUN5P1Q3KNT7 163 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 AARDQ4LEZ3 155 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 KHDC1LQ5JSQ8 128 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 CTRB2Q6GPI1 263 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 OR4X2Q8NGF9 303 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 FANCD2OSQ96PS1 177 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 OR5B12Q96R08 314 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 GON7Q9BXV9 100 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 MAGT1Q9H0U3 335 aa12.07□□□□□ -0.48
SMCO4-206ENST00000596676 GPN1Q9HCN4 374 aaPredicted RBP12.07□□□□□ -0.48
SMCO4-206ENST00000596676 NPIPB5A8MRT5 1133 aa12.06□□□□□ -0.48
SMCO4-206ENST00000596676 SNRPGP15A8MWD9 76 aa12.06□□□□□ -0.48
SMCO4-206ENST00000596676 FAM25EA8MYX2 175 aa12.06□□□□□ -0.48
SMCO4-206ENST00000596676 IFNA21P01568 189 aa12.06□□□□□ -0.48
SMCO4-206ENST00000596676 TRGV3P03979 118 aa12.06□□□□□ -0.48
SMCO4-206ENST00000596676 CRYGCP07315 174 aa12.06□□□□□ -0.48
SMCO4-206ENST00000596676 ELANEP08246 267 aa12.06□□□□□ -0.48
SMCO4-206ENST00000596676 OR5M8Q8NGP6 311 aa12.06□□□□□ -0.48
SMCO4-206ENST00000596676 RBKSQ9H477 322 aa12.06□□□□□ -0.48
SMCO4-206ENST00000596676 GNB4Q9HAV0 340 aa12.06□□□□□ -0.48
SMCO4-206ENST00000596676 S4R3C0 116 aa12.06□□□□□ -0.48
SMCO4-206ENST00000596676 C7orf66A4D0T2 115 aa12.05□□□□□ -0.48
SMCO4-206ENST00000596676 OR2J3O76001 311 aa12.05□□□□□ -0.48
SMCO4-206ENST00000596676 NDUFB8O95169 186 aa12.05□□□□□ -0.48
SMCO4-206ENST00000596676 IGHV3-11P01762 117 aa12.05□□□□□ -0.48
SMCO4-206ENST00000596676 HOXA1P49639 335 aaPredicted RBP12.05□□□□□ -0.48
SMCO4-206ENST00000596676 TPPP2P59282 170 aa12.05□□□□□ -0.48
SMCO4-206ENST00000596676 SPCS3P61009 180 aa12.05□□□□□ -0.48
SMCO4-206ENST00000596676 TNFRSF9Q07011 255 aa12.05□□□□□ -0.48
SMCO4-206ENST00000596676 IAH1Q2TAA2 248 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms