RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 DMRTC2Q8IXT2 367 aaPredicted RBP18.51■□□□□ 0.55
SRRM1-222ENST00000596378 RNASE6Q93091 150 aaKnown RBP18.51■□□□□ 0.55
SRRM1-222ENST00000596378 DERL1Q9BUN8 251 aa18.51■□□□□ 0.55
SRRM1-222ENST00000596378 CTSZQ9UBR2 303 aa18.51■□□□□ 0.55
SRRM1-222ENST00000596378 E7EQL1 145 aa18.5■□□□□ 0.55
SRRM1-222ENST00000596378 GNB1P62873 340 aa18.5■□□□□ 0.55
SRRM1-222ENST00000596378 TEPPQ6URK8 271 aa18.5■□□□□ 0.55
SRRM1-222ENST00000596378 ELOVL1Q9BW60 279 aa18.5■□□□□ 0.55
SRRM1-222ENST00000596378 CTDSP1Q9GZU7 261 aa18.5■□□□□ 0.55
SRRM1-222ENST00000596378 PLEKHA3Q9HB20 300 aa18.5■□□□□ 0.55
SRRM1-222ENST00000596378 AURKAIP1Q9NWT8 199 aaPredicted RBP18.5■□□□□ 0.55
SRRM1-222ENST00000596378 PRNDQ9UKY0 176 aa18.5■□□□□ 0.55
SRRM1-222ENST00000596378 IGFBP2P18065 325 aa18.5■□□□□ 0.55
SRRM1-222ENST00000596378 MEF2CQ06413 473 aaPredicted RBP18.5■□□□□ 0.55
SRRM1-222ENST00000596378 CLEC12BQ2HXU8 276 aa18.5■□□□□ 0.55
SRRM1-222ENST00000596378 C4orf17Q53FE4 359 aa18.5■□□□□ 0.55
SRRM1-222ENST00000596378 STPG3Q8N7X2 389 aa18.5■□□□□ 0.55
SRRM1-222ENST00000596378 SEPSECSQ9HD40 501 aaKnown RBP18.5■□□□□ 0.55
SRRM1-222ENST00000596378 IFITM10A6NMD0 228 aa18.49■□□□□ 0.55
SRRM1-222ENST00000596378 SOX15O60248 233 aa18.49■□□□□ 0.55
SRRM1-222ENST00000596378 TMEM30BQ3MIR4 351 aa18.49■□□□□ 0.55
SRRM1-222ENST00000596378 FRZBQ92765 325 aa18.49■□□□□ 0.55
SRRM1-222ENST00000596378 DYNLRB1Q9NP97 96 aa18.49■□□□□ 0.55
SRRM1-222ENST00000596378 TEX50A0A1B0GTY4 177 aa18.49■□□□□ 0.55
SRRM1-222ENST00000596378 STAG3L2P0CL84 134 aa18.49■□□□□ 0.55
SRRM1-222ENST00000596378 STAG3L3P0CL85 134 aa18.49■□□□□ 0.55
SRRM1-222ENST00000596378 SMIM6P0DI80 62 aa18.49■□□□□ 0.55
SRRM1-222ENST00000596378 PRCDQ00LT1 54 aa18.49■□□□□ 0.55
SRRM1-222ENST00000596378 OR10W1Q8NGF6 305 aa18.49■□□□□ 0.55
SRRM1-222ENST00000596378 S100A9P06702 114 aaKnown RBP18.48■□□□□ 0.55
SRRM1-222ENST00000596378 HOXA5P20719 270 aa18.48■□□□□ 0.55
SRRM1-222ENST00000596378 LRBAP50851 2863 aa18.48■□□□□ 0.55
SRRM1-222ENST00000596378 TRBV24-1A0A075B6N3 115 aa18.48■□□□□ 0.55
SRRM1-222ENST00000596378 DVL1O14640 695 aa18.48■□□□□ 0.55
SRRM1-222ENST00000596378 NDUFB4O95168 129 aa18.48■□□□□ 0.55
SRRM1-222ENST00000596378 HARBI1Q96MB7 349 aa18.48■□□□□ 0.55
SRRM1-222ENST00000596378 NDUFB3O43676 98 aa18.47■□□□□ 0.55
SRRM1-222ENST00000596378 TRGC1P0CF51 173 aa18.47■□□□□ 0.55
SRRM1-222ENST00000596378 CHRNB4P30926 498 aa18.47■□□□□ 0.55
SRRM1-222ENST00000596378 EFNB3Q15768 340 aa18.47■□□□□ 0.55
SRRM1-222ENST00000596378 PGPEP1LA6NFU8 196 aa18.46■□□□□ 0.55
SRRM1-222ENST00000596378 H0YJW9 148 aa18.46■□□□□ 0.55
SRRM1-222ENST00000596378 H7BYZ3 331 aa18.46■□□□□ 0.55
SRRM1-222ENST00000596378 TNFRSF13BO14836 293 aaPredicted RBP18.46■□□□□ 0.55
SRRM1-222ENST00000596378 PFN1P07737 140 aaKnown RBP18.46■□□□□ 0.55
SRRM1-222ENST00000596378 MLANAQ16655 118 aa18.46■□□□□ 0.55
SRRM1-222ENST00000596378 GFI1BQ5VTD9 330 aa18.46■□□□□ 0.55
SRRM1-222ENST00000596378 ZNF257Q9Y2Q1 563 aa18.46■□□□□ 0.55
SRRM1-222ENST00000596378 FOXH1O75593 365 aa18.46■□□□□ 0.55
SRRM1-222ENST00000596378 GALR1P47211 349 aa18.46■□□□□ 0.55
SRRM1-222ENST00000596378 TMEM249Q2WGJ8 235 aa18.46■□□□□ 0.55
SRRM1-222ENST00000596378 LRRC10Q5BKY1 277 aa18.46■□□□□ 0.55
SRRM1-222ENST00000596378 PLAUP00749 431 aa18.45■□□□□ 0.54
SRRM1-222ENST00000596378 OR10A7Q8NGE5 316 aa18.45■□□□□ 0.54
SRRM1-222ENST00000596378 OR10X1Q8NGY0 326 aa18.45■□□□□ 0.54
SRRM1-222ENST00000596378 BET1LQ9NYM9 111 aa18.45■□□□□ 0.54
SRRM1-222ENST00000596378 PDE6DO43924 150 aa18.45■□□□□ 0.54
SRRM1-222ENST00000596378 CXorf1O96002 111 aa18.45■□□□□ 0.54
SRRM1-222ENST00000596378 APOA2P02652 100 aa18.45■□□□□ 0.54
SRRM1-222ENST00000596378 LOXP28300 417 aaPredicted RBP18.45■□□□□ 0.54
SRRM1-222ENST00000596378 PDZD11Q5EBL8 140 aa18.45■□□□□ 0.54
SRRM1-222ENST00000596378 KCNIP2Q9NS61 270 aa18.45■□□□□ 0.54
SRRM1-222ENST00000596378 YTHDF2Q9Y5A9 579 aaKnown RBP18.45■□□□□ 0.54
SRRM1-222ENST00000596378 IGKV1OR2-108A0A075B7D4 117 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 E7EUB6 86 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 PHOX2AO14813 284 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 ACTL6BO94805 426 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 ZNF114Q8NC26 417 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 IGF2RP11717 2491 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 ZZEF1O43149 2961 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 DCHS2Q6V1P9 2916 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 VSTM5A8MXK1 200 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 GATA2P23769 480 aaPredicted RBP18.44■□□□□ 0.54
SRRM1-222ENST00000596378 CHRNA7P36544 502 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 CDX1P47902 265 aaPredicted RBP18.44■□□□□ 0.54
SRRM1-222ENST00000596378 RBPJQ06330 500 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 TCEAL7Q9BRU2 100 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 NIT2Q9NQR4 276 aa18.44■□□□□ 0.54
SRRM1-222ENST00000596378 RPL29P47914 159 aaKnown RBP18.43■□□□□ 0.54
SRRM1-222ENST00000596378 DLX1P56177 255 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 LINC01551Q86U37 167 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 OR5AN1Q8NGI8 311 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 OSR1Q8TAX0 266 aaPredicted RBP18.43■□□□□ 0.54
SRRM1-222ENST00000596378 LINC01560Q8TB33 94 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 SPTA1P02549 2419 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.43■□□□□ 0.54
SRRM1-222ENST00000596378 SCO2A0A1W2PP80 73 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 LINC00869P0C866 280 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 PRR20EP86478 221 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 PRR20CP86479 221 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 PRR20DP86480 221 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 PRR20BP86481 221 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 PRR20AP86496 221 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 PRB3Q04118 309 aaPredicted RBP18.43■□□□□ 0.54
SRRM1-222ENST00000596378 RAB31Q13636 194 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 OR5B12Q96R08 314 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 NGBQ9NPG2 151 aa18.43■□□□□ 0.54
SRRM1-222ENST00000596378 TACC2O95359 2948 aa18.42■□□□□ 0.54
SRRM1-222ENST00000596378 A0A1W2PPQ1 181 aa18.42■□□□□ 0.54
SRRM1-222ENST00000596378 LYNX1G3V0Z9 82 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms