RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 VCX3BQ9H321 246 aa12.92□□□□□ -0.34
RETREG3-212ENST00000593251 DAZ1Q9NQZ3 744 aaKnown RBP12.92□□□□□ -0.34
RETREG3-212ENST00000593251 RHBDL2Q9NX52 303 aa12.92□□□□□ -0.34
RETREG3-212ENST00000593251 TRAV18A0A075B6X5 111 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 OR13C7P0DN81 318 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 MFAP2P55001 183 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 WT1-ASQ06250 92 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 CATR1Q13166 79 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 MSMO1Q15800 293 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 POU2AF1Q16633 256 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 LAMTOR1Q6IAA8 161 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 SFXN4Q6P4A7 337 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 ZNF818PQ6ZRF7 136 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 GDPD1Q8N9F7 314 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 ZBTB34Q8NCN2 500 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 OR5H6Q8NGV6 325 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 VN1R17PQ8TDU5 208 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 PHLDA1Q8WV24 401 aaPredicted RBP12.91□□□□□ -0.34
RETREG3-212ENST00000593251 CHRDL1Q9BU40 450 aa12.91□□□□□ -0.34
RETREG3-212ENST00000593251 KIR2DL5BA0A0G2JN68 375 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 KIR2DL5BA0A0G2JPC4 375 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 TEX50A0A1B0GTY4 177 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 SERPINE2P07093 398 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 CTSDP07339 412 aaPredicted RBP12.9□□□□□ -0.34
RETREG3-212ENST00000593251 FGF9P31371 208 aaPredicted RBP12.9□□□□□ -0.34
RETREG3-212ENST00000593251 HSPA13P48723 471 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 ZNF124Q15973 351 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 IZUMO2Q6UXV1 221 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 TMEM17Q86X19 198 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 HOGA1Q86XE5 327 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 APRG1Q8IVJ8 170 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 KIR2DL5AQ8N109 375 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 KIR2DL5BQ8NHK3 375 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 SRSF8Q9BRL6 282 aaKnown RBP12.9□□□□□ -0.34
RETREG3-212ENST00000593251 MAP6D1Q9H9H5 199 aa12.9□□□□□ -0.34
RETREG3-212ENST00000593251 NDUFA4O00483 81 aa12.89□□□□□ -0.35
RETREG3-212ENST00000593251 CLEC2LP0C7M8 214 aa12.89□□□□□ -0.35
RETREG3-212ENST00000593251 TRAPPC2P0DI81 140 aa12.89□□□□□ -0.35
RETREG3-212ENST00000593251 TRAPPC2BP0DI82 140 aa12.89□□□□□ -0.35
RETREG3-212ENST00000593251 ATF4P18848 351 aaPredicted RBP12.89□□□□□ -0.35
RETREG3-212ENST00000593251 PSMB9P28065 219 aa12.89□□□□□ -0.35
RETREG3-212ENST00000593251 MXD1Q05195 221 aa12.89□□□□□ -0.35
RETREG3-212ENST00000593251 AADACL3Q5VUY0 350 aa12.89□□□□□ -0.35
RETREG3-212ENST00000593251 TPRA1Q86W33 373 aa12.89□□□□□ -0.35
RETREG3-212ENST00000593251 UBAC2Q8NBM4 344 aa12.89□□□□□ -0.35
RETREG3-212ENST00000593251 SLC25A38Q96DW6 304 aa12.89□□□□□ -0.35
RETREG3-212ENST00000593251 GALNT14Q96FL9 552 aa12.89□□□□□ -0.35
RETREG3-212ENST00000593251 BSCL2Q96G97 398 aaPredicted RBP12.89□□□□□ -0.35
RETREG3-212ENST00000593251 HINT2Q9BX68 163 aa12.89□□□□□ -0.35
RETREG3-212ENST00000593251 MEIS3P1A6NDR6 274 aa12.88□□□□□ -0.35
RETREG3-212ENST00000593251 OR4C46A6NHA9 309 aa12.88□□□□□ -0.35
RETREG3-212ENST00000593251 F8W735 103 aaPredicted RBP12.88□□□□□ -0.35
RETREG3-212ENST00000593251 ADMP35318 185 aa12.88□□□□□ -0.35
RETREG3-212ENST00000593251 UBE2UQ5VVX9 321 aa12.88□□□□□ -0.35
RETREG3-212ENST00000593251 TMEM217Q8N7C4 229 aa12.88□□□□□ -0.35
RETREG3-212ENST00000593251 SCARB1Q8WTV0 552 aa12.88□□□□□ -0.35
RETREG3-212ENST00000593251 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
RETREG3-212ENST00000593251 C21orf62Q9NYP8 219 aa12.88□□□□□ -0.35
RETREG3-212ENST00000593251 NSG2Q9Y328 171 aa12.88□□□□□ -0.35
RETREG3-212ENST00000593251 CYB5BO43169 146 aa12.87□□□□□ -0.35
RETREG3-212ENST00000593251 SDC2P34741 201 aa12.87□□□□□ -0.35
RETREG3-212ENST00000593251 SPSB3Q6PJ21 355 aa12.87□□□□□ -0.35
RETREG3-212ENST00000593251 OR1L8Q8NGR8 309 aa12.87□□□□□ -0.35
RETREG3-212ENST00000593251 CD300LFQ8TDQ1 290 aa12.87□□□□□ -0.35
RETREG3-212ENST00000593251 RNF167Q9H6Y7 350 aa12.87□□□□□ -0.35
RETREG3-212ENST00000593251 F11RQ9Y624 299 aaKnown RBP12.87□□□□□ -0.35
RETREG3-212ENST00000593251 VPS13DQ5THJ4 4388 aa12.87□□□□□ -0.35
RETREG3-212ENST00000593251 IGKV3-7A0A075B6H7 116 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 IGHV3-49A0A0A0MS15 119 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 TFPI2P48307 235 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 NANOS2P60321 138 aaKnown RBP12.86□□□□□ -0.35
RETREG3-212ENST00000593251 ERVK-16P61578 105 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 Q56UQ5 140 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 IDNKQ5T6J7 187 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 LGALS9CQ6DKI2 356 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 THOC7Q6I9Y2 204 aaKnown RBP12.86□□□□□ -0.35
RETREG3-212ENST00000593251 GIMAP1Q8WWP7 306 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 ZNF414Q96IQ9 312 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 RNF2Q99496 336 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 AUNIPQ9H7T9 357 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 NDUFA4L2Q9NRX3 87 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 COMMD9Q9P000 198 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 SSR3Q9UNL2 185 aa12.86□□□□□ -0.35
RETREG3-212ENST00000593251 MARCH11A6NNE9 402 aa12.85□□□□□ -0.35
RETREG3-212ENST00000593251 K7EIM0 57 aa12.85□□□□□ -0.35
RETREG3-212ENST00000593251 K7EMT4 169 aa12.85□□□□□ -0.35
RETREG3-212ENST00000593251 MRPS14O60783 128 aaKnown RBP12.85□□□□□ -0.35
RETREG3-212ENST00000593251 RLN1P04808 185 aa12.85□□□□□ -0.35
RETREG3-212ENST00000593251 GNRHRP30968 328 aa12.85□□□□□ -0.35
RETREG3-212ENST00000593251 GABARAPL2P60520 117 aa12.85□□□□□ -0.35
RETREG3-212ENST00000593251 HERV-K104P61576 105 aa12.85□□□□□ -0.35
RETREG3-212ENST00000593251 HSD17B13Q7Z5P4 300 aaPredicted RBP12.85□□□□□ -0.35
RETREG3-212ENST00000593251 SPARTQ8N0X7 666 aa12.85□□□□□ -0.35
RETREG3-212ENST00000593251 OR5AP2Q8NGF4 316 aa12.85□□□□□ -0.35
RETREG3-212ENST00000593251 LSM10Q969L4 123 aaKnown RBP12.85□□□□□ -0.35
RETREG3-212ENST00000593251 FBXL17Q9UF56 701 aa12.85□□□□□ -0.35
RETREG3-212ENST00000593251 SMPXQ9UHP9 88 aa12.85□□□□□ -0.35
RETREG3-212ENST00000593251 OR51B2Q9Y5P1 312 aa12.85□□□□□ -0.35
RETREG3-212ENST00000593251 KRASP01116 189 aa12.84□□□□□ -0.35
RETREG3-212ENST00000593251 FGF2P09038 288 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms