RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TMEM50AO95807 157 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 CEACAM3P40198 252 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 PYY3Q5JQD4 70 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 SAA2-SAA4A0A096LPE2 208 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 YPEL1O60688 119 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 SAA2P0DJI9 122 aaPredicted RBP14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 MC5RP33032 325 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 OR5R1Q8NH85 324 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 YPEL2Q96QA6 119 aa14.29□□□□□ -0.12
SMARCA4-215ENST00000590574 TIMM23BQ5SRD1 257 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 COLCA1Q6ZS62 124 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 LINC00469Q8N7U9 141 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 ZNF596Q8TC21 504 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 OR4C13Q8NGP0 309 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 MRPL32Q9BYC8 188 aaKnown RBP14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 WDR83OSQ9Y284 106 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 RIGQ13278 110 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 FAM90A2PQ658T7 463 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 VPS25Q9BRG1 176 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 MMDQ15546 238 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 ACSF3Q4G176 576 aaPredicted RBP14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 COL5A1-AS1Q5SY13 56 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 GBGT1Q8N5D6 347 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 RNF24Q9Y225 148 aa14.28□□□□□ -0.12
SMARCA4-215ENST00000590574 A8MWL6 223 aa14.27□□□□□ -0.12
SMARCA4-215ENST00000590574 H3BTX0 84 aa14.27□□□□□ -0.12
SMARCA4-215ENST00000590574 IFI27L2Q9H2X8 130 aa14.27□□□□□ -0.12
SMARCA4-215ENST00000590574 YTHDF2Q9Y5A9 579 aaKnown RBP14.27□□□□□ -0.12
SMARCA4-215ENST00000590574 ADMP35318 185 aa14.27□□□□□ -0.13
SMARCA4-215ENST00000590574 KRTCAP3Q53RY4 240 aa14.27□□□□□ -0.13
SMARCA4-215ENST00000590574 RNF224P0DH78 156 aa14.27□□□□□ -0.13
SMARCA4-215ENST00000590574 CD99P14209 185 aa14.27□□□□□ -0.13
SMARCA4-215ENST00000590574 FAM90A1Q86YD7 464 aa14.27□□□□□ -0.13
SMARCA4-215ENST00000590574 METRNQ9UJH8 293 aa14.27□□□□□ -0.13
SMARCA4-215ENST00000590574 C15orf61A6NNL5 157 aa14.27□□□□□ -0.13
SMARCA4-215ENST00000590574 TAS2R60P59551 318 aa14.27□□□□□ -0.13
SMARCA4-215ENST00000590574 FAM27E3Q08E93 113 aa14.27□□□□□ -0.13
SMARCA4-215ENST00000590574 THYN1Q9P016 225 aa14.27□□□□□ -0.13
SMARCA4-215ENST00000590574 PAX9P55771 341 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 LINC00205P59089 165 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 ZCCHC14Q8WYQ9 949 aaKnown RBP14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 FOXF2Q12947 444 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 ZNF585BQ52M93 769 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 PGLYRP4Q96LB8 373 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 IGHV1-18A0A0C4DH31 117 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 AMBPP02760 352 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 JOSD1Q15040 202 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 FAM122AQ96E09 287 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 CBY3A6NI87 242 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 TMEM30BQ3MIR4 351 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 PEAR1Q5VY43 1037 aaPredicted RBP14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 TREML4Q6UXN2 200 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 RAB1CQ92928 201 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 RAB1BQ9H0U4 201 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 CRIM1Q9NZV1 1036 aa14.26□□□□□ -0.13
SMARCA4-215ENST00000590574 NPIPB11E5RHQ5 1161 aa14.25□□□□□ -0.13
SMARCA4-215ENST00000590574 MOSP00540 346 aa14.25□□□□□ -0.13
SMARCA4-215ENST00000590574 SSC4DQ8WTU2 575 aa14.25□□□□□ -0.13
SMARCA4-215ENST00000590574 ATG101Q9BSB4 218 aa14.25□□□□□ -0.13
SMARCA4-215ENST00000590574 RNF115Q9Y4L5 304 aa14.25□□□□□ -0.13
SMARCA4-215ENST00000590574 TMSB15BA0A087X1C1 80 aa14.25□□□□□ -0.13
SMARCA4-215ENST00000590574 TEX50A0A1B0GTY4 177 aa14.25□□□□□ -0.13
SMARCA4-215ENST00000590574 OCC1Q8TAD7 63 aa14.25□□□□□ -0.13
SMARCA4-215ENST00000590574 CACNA1DQ01668 2161 aa14.25□□□□□ -0.13
SMARCA4-215ENST00000590574 ATOH7Q8N100 152 aa14.25□□□□□ -0.13
SMARCA4-215ENST00000590574 C5orf17Q8NAS9 161 aa14.25□□□□□ -0.13
SMARCA4-215ENST00000590574 FCER1GP30273 86 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 LINC00305Q7Z4B0 112 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 TMEM186Q96B77 213 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 ZNF503-AS2A6NEH8 195 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 LINC00473A8K010 186 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 ATP5IP56385 69 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 TMEM177Q53S58 311 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 DERL1Q9BUN8 251 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 EFNB3Q15768 340 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 MRPL20Q9BYC9 149 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 UQCR10Q9UDW1 63 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 HINT1P49773 126 aaPredicted RBP14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 ZNF600Q6ZNG1 722 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 AGMATQ9BSE5 352 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 RNASE7Q9H1E1 156 aaKnown RBP14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 HSPB8Q9UJY1 196 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 UTRNP46939 3433 aa14.24□□□□□ -0.13
SMARCA4-215ENST00000590574 SERF1AO75920 110 aa14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 CD177Q8N6Q3 437 aa14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 OSR1Q8TAX0 266 aaPredicted RBP14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 GOLT1BQ9Y3E0 138 aa14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 TCF21O43680 179 aa14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 RNF138Q8WVD3 245 aa14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 TM4SF5O14894 197 aa14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 RBFOX2O43251 390 aaKnown RBP eCLIP14.23□□□□□ -0.133e-7■■□□□ 14.3
SMARCA4-215ENST00000590574 SSX8Q7RTT4 187 aa14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 OR9G1Q8NH87 305 aa14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 COQ2Q96H96 371 aa14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 TBL2Q9Y4P3 447 aaKnown RBP14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 CD59P13987 128 aa14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 MAS1LP35410 378 aa14.23□□□□□ -0.13
SMARCA4-215ENST00000590574 CORTO00230 105 aa14.22□□□□□ -0.13
SMARCA4-215ENST00000590574 CD40P25942 277 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms