RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 ZNF675Q8TD23 568 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 MBD3L1Q8WWY6 194 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 RAB8BQ92930 207 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 GNPNAT1Q96EK6 184 aaPredicted RBP0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 TTTY13Q9BZ97 58 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 HRASLSQ9HDD0 168 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 ZNHIT6Q9NWK9 470 aaKnown RBP0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 C3orf18Q9UK00 162 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 ANAPC10Q9UM13 185 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 COQ4Q9Y3A0 265 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 ZCCHC11Q5TAX3 1644 aaKnown RBP0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 CHD5Q8TDI0 1954 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 CELSR3Q9NYQ7 3312 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 ABCC2Q92887 1545 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 NCAPD3P42695 1498 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 GRIN2AQ12879 1464 aa0.73□□□□□ -2.29
HMGN1P30-201ENST00000589286 LAMA3Q16787 3333 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 UHRF1BP1Q6BDS2 1440 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 PHLPP1O60346 1717 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 SUPT6HQ7KZ85 1726 aaKnown RBP0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 LOC400499M0QZD8 3231 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 PDZD2O15018 2839 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 DICER1Q9UPY3 1922 aaKnown RBP0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 LRP5O75197 1615 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 ITPR1Q14643 2758 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 LRRN3E7EW58 273 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 COX7A2LO14548 114 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 CIAO1O76071 339 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 CCL5P13501 91 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 MYL12AP19105 171 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 CA5AP35218 305 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 REG1BP48304 166 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 TPI1P60174 286 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 EMX1Q04741 257 aaPredicted RBP0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 TNFAIP8L3Q5GJ75 292 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 CLVS2Q5SYC1 327 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 OGFRL1Q5TC84 451 aaPredicted RBP0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 SFXN4Q6P4A7 337 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 CD200R1LQ6Q8B3 271 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 SLC36A1Q7Z2H8 476 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 COMMD7Q86VX2 200 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 IQCF2Q8IXL9 164 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 OR2T27Q8NH04 317 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 DDI1Q8WTU0 396 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 RAB2BQ8WUD1 216 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 ADAT1Q9BUB4 502 aaKnown RBP0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 DRC3Q9H069 523 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 OR51I2Q9H344 312 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 FGFR1OP2Q9NVK5 253 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 CHD7Q9P2D1 2997 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 PRELID1Q9Y255 219 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 RBM7Q9Y580 266 aaKnown RBP0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 TOPBP1Q92547 1522 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 WDR90Q96KV7 1748 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 CELSR1Q9NYQ6 3014 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 C9orf84Q5VXU9 1444 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 PBRM1Q86U86 1689 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 ROBO1Q9Y6N7 1651 aa0.72□□□□□ -2.29
HMGN1P30-201ENST00000589286 LAMA5O15230 3695 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 SMG1Q96Q15 3661 aaKnown RBP0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 DSPP15924 2871 aaKnown RBP0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 TARBP1Q13395 1621 aaKnown RBP0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 KDM5CP41229 1560 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 NRKQ7Z2Y5 1582 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 MROH2BQ7Z745 1585 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 DCAF1Q9Y4B6 1507 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 IGHV1-18A0A0C4DH31 117 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 IGHV1-69-2A0A0G2JMI3 117 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 A0A0J9YW62 118 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 OR4C45A6NMZ5 311 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 EVPLLA8MZ36 301 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 LST1O00453 97 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 ACOX3O15254 700 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 PLA2G10O15496 165 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 ISG15P05161 165 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 EVX1P49640 407 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 RAB5BP61020 215 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 MAGOHP61326 146 aaKnown RBP0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 POLR2GP62487 172 aaKnown RBP eCLIP0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 HIST1H4AP62805 103 aaKnown RBP0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 ELOBQ15370 118 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 RSU1Q15404 277 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 SURF2Q15527 256 aaPredicted RBP0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 ACSM3Q53FZ2 586 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 C1orf195Q5TG92 126 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 C5orf46Q6UWT4 87 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 RASSF6Q6ZTQ3 369 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 C7orf65Q6ZTY9 151 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 SLC51BQ86UW2 128 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 C10orf67Q8IYJ2 551 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 DYNAPQ8N1N2 210 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 SLC22A24Q8N4F4 322 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 DEFB125Q8N687 156 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 PTH2Q96A98 100 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 TESCQ96BS2 214 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 OPTNQ96CV9 577 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 NMNAT3Q96T66 252 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 XAGE1AQ9HD64 81 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 GPR84Q9NQS5 396 aa0.71□□□□□ -2.3
HMGN1P30-201ENST00000589286 XPNPEP1Q9NQW7 623 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms