RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SLA2Q9H6Q3 261 aa15.34■□□□□ 0.05
CIRBP-220ENST00000588917 GPN1Q9HCN4 374 aaPredicted RBP15.34■□□□□ 0.05
CIRBP-220ENST00000588917 COA4Q9NYJ1 87 aa15.34■□□□□ 0.05
CIRBP-220ENST00000588917 A0A0B4J293 547 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 A0A1B0GU03 582 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 TCRBV4S1A1TA0A5B7 111 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 WIPF1O43516 503 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 IFNA21P01568 189 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 SULT1A3P0DMM9 295 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 SULT1A4P0DMN0 295 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 SLC25A6P12236 298 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 CD83Q01151 205 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 C10orf55Q5SWW7 151 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 RNF152Q8N8N0 203 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 ZNF431Q8TF32 576 aaPredicted RBP15.33■□□□□ 0.04
CIRBP-220ENST00000588917 MITD1Q8WV92 249 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 NDUFA4L2Q9NRX3 87 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 PRR13Q9NZ81 148 aa15.33■□□□□ 0.04
CIRBP-220ENST00000588917 CYB5BO43169 146 aa15.32■□□□□ 0.04
CIRBP-220ENST00000588917 IFNA17P01571 189 aa15.32■□□□□ 0.04
CIRBP-220ENST00000588917 CD28P10747 220 aa15.32■□□□□ 0.04
CIRBP-220ENST00000588917 PSMB8P28062 276 aa15.32■□□□□ 0.04
CIRBP-220ENST00000588917 KRTAP10-3P60369 221 aa15.32■□□□□ 0.04
CIRBP-220ENST00000588917 NMSQ5H8A3 153 aa15.32■□□□□ 0.04
CIRBP-220ENST00000588917 OR5T1Q8NG75 326 aa15.32■□□□□ 0.04
CIRBP-220ENST00000588917 OR52E5Q8NH55 327 aa15.32■□□□□ 0.04
CIRBP-220ENST00000588917 FAM110DQ8TAY7 271 aaPredicted RBP15.32■□□□□ 0.04
CIRBP-220ENST00000588917 HINT2Q9BX68 163 aa15.32■□□□□ 0.04
CIRBP-220ENST00000588917 ZNF355PQ9NSJ1 428 aa15.32■□□□□ 0.04
CIRBP-220ENST00000588917 TSSC4Q9Y5U2 329 aaPredicted RBP15.32■□□□□ 0.04
CIRBP-220ENST00000588917 MEGF8Q7Z7M0 2845 aa15.32■□□□□ 0.04
CIRBP-220ENST00000588917 HMX3A6NHT5 357 aa15.31■□□□□ 0.04
CIRBP-220ENST00000588917 NPIPB5A8MRT5 1133 aa15.31■□□□□ 0.04
CIRBP-220ENST00000588917 TEX22C9J3V5 150 aa15.31■□□□□ 0.04
CIRBP-220ENST00000588917 E7EUB6 86 aa15.31■□□□□ 0.04
CIRBP-220ENST00000588917 PF4V1P10720 104 aa15.31■□□□□ 0.04
CIRBP-220ENST00000588917 RAB9AP51151 201 aa15.31■□□□□ 0.04
CIRBP-220ENST00000588917 SMCO1Q147U7 214 aa15.31■□□□□ 0.04
CIRBP-220ENST00000588917 IZUMO4Q1ZYL8 232 aa15.31■□□□□ 0.04
CIRBP-220ENST00000588917 AARDQ4LEZ3 155 aa15.31■□□□□ 0.04
CIRBP-220ENST00000588917 ASPHD1Q5U4P2 390 aa15.31■□□□□ 0.04
CIRBP-220ENST00000588917 Q6ZRM9 215 aa15.31■□□□□ 0.04
CIRBP-220ENST00000588917 CACNG5Q9UF02 275 aa15.31■□□□□ 0.04
CIRBP-220ENST00000588917 A0A0G2JRQ6 117 aa15.3■□□□□ 0.04
CIRBP-220ENST00000588917 SNRPGP15A8MWD9 76 aa15.3■□□□□ 0.04
CIRBP-220ENST00000588917 CRYGCP07315 174 aa15.3■□□□□ 0.04
CIRBP-220ENST00000588917 HOXB5P09067 269 aa15.3■□□□□ 0.04
CIRBP-220ENST00000588917 MYOD1P15172 320 aa15.3■□□□□ 0.04
CIRBP-220ENST00000588917 PSMB6P28072 239 aa15.3■□□□□ 0.04
CIRBP-220ENST00000588917 SPCS3P61009 180 aa15.3■□□□□ 0.04
CIRBP-220ENST00000588917 ERHP84090 104 aaKnown RBP15.3■□□□□ 0.04
CIRBP-220ENST00000588917 PRCDQ00LT1 54 aa15.3■□□□□ 0.04
CIRBP-220ENST00000588917 RGS21Q2M5E4 152 aa15.3■□□□□ 0.04
CIRBP-220ENST00000588917 C10orf99Q6UWK7 81 aa15.3■□□□□ 0.04
CIRBP-220ENST00000588917 NDUFA11Q86Y39 141 aa15.3■□□□□ 0.04
CIRBP-220ENST00000588917 C12orf45Q8N5I9 185 aaPredicted RBP15.3■□□□□ 0.04
CIRBP-220ENST00000588917 C11orf44Q8N8P7 122 aa15.3■□□□□ 0.04
CIRBP-220ENST00000588917 CITED2Q99967 270 aaPredicted RBP15.3■□□□□ 0.04
CIRBP-220ENST00000588917 CGB1A6NKQ9 187 aa15.29■□□□□ 0.04
CIRBP-220ENST00000588917 DBX1A6NMT0 343 aa15.29■□□□□ 0.04
CIRBP-220ENST00000588917 ST8SIA3O43173 380 aa15.29■□□□□ 0.04
CIRBP-220ENST00000588917 APELAP0DMC3 54 aa15.29■□□□□ 0.04
CIRBP-220ENST00000588917 DEFA4P12838 97 aa15.29■□□□□ 0.04
CIRBP-220ENST00000588917 CDX1P47902 265 aaPredicted RBP15.29■□□□□ 0.04
CIRBP-220ENST00000588917 SRSF4Q08170 494 aaKnown RBP15.29■□□□□ 0.04
CIRBP-220ENST00000588917 TCTEX1D4Q5JR98 221 aa15.29■□□□□ 0.04
CIRBP-220ENST00000588917 OR52B4Q8NGK2 314 aa15.29■□□□□ 0.04
CIRBP-220ENST00000588917 OR1L6Q8NGR2 347 aa15.29■□□□□ 0.04
CIRBP-220ENST00000588917 PLEKHA3Q9HB20 300 aa15.29■□□□□ 0.04
CIRBP-220ENST00000588917 ENY2Q9NPA8 101 aa15.29■□□□□ 0.04
CIRBP-220ENST00000588917 A0A0G2JLM5 398 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 A0A1B0GW64 132 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 IGLC7A0M8Q6 106 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 INS-IGF2F8WCM5 200 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 SOX15O60248 233 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 TRGV3P03979 118 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 OR13C7P0DN81 318 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 HIST1H1BP16401 226 aaKnown RBP15.28■□□□□ 0.04
CIRBP-220ENST00000588917 CTRB1P17538 263 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 PDLIM3Q53GG5 364 aaPredicted RBP15.28■□□□□ 0.04
CIRBP-220ENST00000588917 GGNBP1Q5YKI7 109 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 CTRB2Q6GPI1 263 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 OR10W1Q8NGF6 305 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 OR1S1Q8NH92 325 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 UBE2E2Q96LR5 201 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 SEC22CQ9BRL7 303 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 THYN1Q9P016 225 aa15.28■□□□□ 0.04
CIRBP-220ENST00000588917 PKD1L1Q8TDX9 2849 aa15.27■□□□□ 0.04
CIRBP-220ENST00000588917 RPLP1P05386 114 aaKnown RBP15.27■□□□□ 0.04
CIRBP-220ENST00000588917 AREGP15514 252 aa15.27■□□□□ 0.04
CIRBP-220ENST00000588917 KHDC1LQ5JSQ8 128 aa15.27■□□□□ 0.04
CIRBP-220ENST00000588917 UXS1Q8NBZ7 420 aa15.27■□□□□ 0.04
CIRBP-220ENST00000588917 USMG5Q96IX5 58 aa15.27■□□□□ 0.04
CIRBP-220ENST00000588917 MS4A10Q96PG2 267 aa15.27■□□□□ 0.04
CIRBP-220ENST00000588917 KLK15Q9H2R5 256 aa15.27■□□□□ 0.04
CIRBP-220ENST00000588917 FAM90A26D6RGX4 464 aa15.26■□□□□ 0.03
CIRBP-220ENST00000588917 M0QZ24 198 aa15.26■□□□□ 0.03
CIRBP-220ENST00000588917 SNCAP37840 140 aa15.26■□□□□ 0.03
CIRBP-220ENST00000588917 SUB1P53999 127 aaKnown RBP eCLIP15.26■□□□□ 0.037e-8■□□□□ 9.3
CIRBP-220ENST00000588917 TPPP2P59282 170 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms