RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 PRCDQ00LT1 54 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 VWC2Q2TAL6 325 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 VMA21Q3ZAQ7 101 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 ETV3LQ6ZN32 361 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 MOB3BQ86TA1 216 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 Q8N3U1 123 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 Q8N7P7 452 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 OR4A5Q8NH83 315 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 RPEQ96AT9 228 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 CCL19Q99731 98 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 MS4A7Q9GZW8 240 aaPredicted RBP7.09□□□□□ -1.27
SMAD4-206ENST00000588860 PLEKHA3Q9HB20 300 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 FKBP11Q9NYL4 201 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 ZNF257Q9Y2Q1 563 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 TIMM9Q9Y5J7 89 aa7.09□□□□□ -1.27
SMAD4-206ENST00000588860 APCP25054 2843 aa7.09□□□□□ -1.28
SMAD4-206ENST00000588860 AKAP6Q13023 2319 aa7.09□□□□□ -1.28
SMAD4-206ENST00000588860 IGHV1-3A0A0C4DH29 117 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 TMEM218A2RU14 115 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
SMAD4-206ENST00000588860 OVOL3O00110 214 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 CA2P00918 260 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 IGLV2-23P01705 113 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 IGHV2-5P01817 119 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 APOC3P02656 99 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 IFNA4P05014 189 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 H2AFB1P0C5Y9 115 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 USF1P22415 310 aaPredicted RBP7.08□□□□□ -1.28
SMAD4-206ENST00000588860 PDLIM4P50479 330 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 DVL1P1P54792 670 aaPredicted RBP7.08□□□□□ -1.28
SMAD4-206ENST00000588860 RAB2AP61019 212 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 RPL8P62917 257 aaKnown RBP7.08□□□□□ -1.28
SMAD4-206ENST00000588860 DLK1P80370 383 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 KLRD1Q13241 179 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 HNF4GQ14541 408 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 PEA15Q15121 130 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 GUK1Q16774 197 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 TMEM41BQ5BJD5 291 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 TPTE2P1Q5T6R2 138 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 LFNGQ8NES3 379 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 SLC24A4Q8NFF2 622 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 OR4P4Q8NGL7 312 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 VSTM2AQ8TAG5 236 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 TMEM167AQ8TBQ9 72 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 SIRT7Q9NRC8 400 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 INSIG2Q9Y5U4 225 aa7.08□□□□□ -1.28
SMAD4-206ENST00000588860 KLF2Q9Y5W3 355 aaPredicted RBP7.08□□□□□ -1.28
SMAD4-206ENST00000588860 F8W036 122 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 LY6LH3BQJ8 138 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 SLC25A17O43808 307 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 IGHV4-39P01824 125 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 HBE1P02100 147 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 ADCYAP1P18509 176 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 ZFP36P26651 326 aaKnown RBP7.07□□□□□ -1.28
SMAD4-206ENST00000588860 LCN2P80188 198 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 SERF2P84101 59 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 DEFA5Q01523 94 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 FFAR4Q5NUL3 377 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 SPSB3Q6PJ21 355 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 VMO1Q7Z5L0 202 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 KIR3DL3Q8N743 410 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 ZNF709Q8N972 641 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 OR1L8Q8NGR8 309 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 OR5B3Q8NH48 314 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 SFT2D1Q8WV19 159 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 TMEM170AQ8WVE7 144 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 RITA1Q96K30 269 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 PBDC1Q9BVG4 233 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 GGACTQ9BVM4 153 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 NPCDR1Q9BY65 106 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 COMMD5Q9GZQ3 224 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 EIF5A2Q9GZV4 153 aaKnown RBP7.07□□□□□ -1.28
SMAD4-206ENST00000588860 VSIRQ9H7M9 311 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 ZNF430Q9H8G1 570 aaPredicted RBP7.07□□□□□ -1.28
SMAD4-206ENST00000588860 RPRMQ9NS64 109 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 DCHS2Q6V1P9 2916 aa7.07□□□□□ -1.28
SMAD4-206ENST00000588860 NIPBLQ6KC79 2804 aaeCLIP7.06□□□□□ -1.282e-7■□□□□ 8.6
SMAD4-206ENST00000588860 A0A1W2PPI3 338 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 A0A1W2PRD5 423 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 A0A1W2PRF3 423 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 A0A1W2PRM7 423 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 BTBD17A6NE02 478 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 C9JQL5 133 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 PRSS46E5RG02 174 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 C17orf112F2Z3M2 114 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 CD5P06127 495 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 SFTA3P0C7M3 94 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 PRTN3P24158 256 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 HTR1DP28221 377 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 CD1BP29016 333 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 LGALS7P47929 136 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 CCL20P78556 96 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 HCP5Q6MZN7 132 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 ACSM6Q6P461 480 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 CENPVQ7Z7K6 275 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-206ENST00000588860 OR11H6Q8NGC7 330 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 CLDND2Q8NHS1 167 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 RCC1LQ96I51 464 aaKnown RBP7.06□□□□□ -1.28
SMAD4-206ENST00000588860 BPESC1Q9GZL8 116 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms