RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 SMPXQ9UHP9 88 aa11.14□□□□□ -0.63
IFT20-216ENST00000588477 PKD1P98161 4303 aa11.14□□□□□ -0.63
IFT20-216ENST00000588477 IGHV4-4A0A075B6R2 117 aa11.13□□□□□ -0.63
IFT20-216ENST00000588477 C15orf62A8K5M9 175 aa11.13□□□□□ -0.63
IFT20-216ENST00000588477 CYB5BO43169 146 aa11.13□□□□□ -0.63
IFT20-216ENST00000588477 MRPS14O60783 128 aaKnown RBP11.13□□□□□ -0.63
IFT20-216ENST00000588477 OR10A3P58181 314 aa11.13□□□□□ -0.63
IFT20-216ENST00000588477 CDNFQ49AH0 187 aa11.13□□□□□ -0.63
IFT20-216ENST00000588477 CNIH2Q6PI25 160 aa11.13□□□□□ -0.63
IFT20-216ENST00000588477 SPAG16Q8N0X2 631 aa11.13□□□□□ -0.63
IFT20-216ENST00000588477 GBGT1Q8N5D6 347 aa11.13□□□□□ -0.63
IFT20-216ENST00000588477 UBAC2Q8NBM4 344 aa11.13□□□□□ -0.63
IFT20-216ENST00000588477 ATG5Q9H1Y0 275 aa11.13□□□□□ -0.63
IFT20-216ENST00000588477 C8orf4Q9NR00 106 aa11.13□□□□□ -0.63
IFT20-216ENST00000588477 IGHV3-49A0A0A0MS15 119 aa11.12□□□□□ -0.63
IFT20-216ENST00000588477 UPK2O00526 184 aa11.12□□□□□ -0.63
IFT20-216ENST00000588477 CHEK1O14757 476 aa11.12□□□□□ -0.63
IFT20-216ENST00000588477 SERPINE2P07093 398 aa11.12□□□□□ -0.63
IFT20-216ENST00000588477 OR13C7P0DN81 318 aa11.12□□□□□ -0.63
IFT20-216ENST00000588477 PSMA1P25786 263 aaKnown RBP11.12□□□□□ -0.63
IFT20-216ENST00000588477 NR2C2APQ86WQ0 139 aa11.12□□□□□ -0.63
IFT20-216ENST00000588477 GDPD1Q8N9F7 314 aa11.12□□□□□ -0.63
IFT20-216ENST00000588477 SCARB1Q8WTV0 552 aa11.12□□□□□ -0.63
IFT20-216ENST00000588477 SRSF8Q9BRL6 282 aaKnown RBP11.12□□□□□ -0.63
IFT20-216ENST00000588477 RHPN1-AS1Q9BWJ2 59 aa11.12□□□□□ -0.63
IFT20-216ENST00000588477 QTRT1Q9BXR0 403 aaKnown RBP11.12□□□□□ -0.63
IFT20-216ENST00000588477 HRH4Q9H3N8 390 aa11.12□□□□□ -0.63
IFT20-216ENST00000588477 CCL28Q9NRJ3 127 aa11.12□□□□□ -0.63
IFT20-216ENST00000588477 C21orf62Q9NYP8 219 aa11.12□□□□□ -0.63
IFT20-216ENST00000588477 IGHV7-4-1A0A0J9YVY3 117 aa11.11□□□□□ -0.63
IFT20-216ENST00000588477 F8W735 103 aaPredicted RBP11.11□□□□□ -0.63
IFT20-216ENST00000588477 M0R2N4 97 aa11.11□□□□□ -0.63
IFT20-216ENST00000588477 RTL8CO15255 209 aa11.11□□□□□ -0.63
IFT20-216ENST00000588477 HLA-DMBP28068 263 aa11.11□□□□□ -0.63
IFT20-216ENST00000588477 WT1-ASQ06250 92 aa11.11□□□□□ -0.63
IFT20-216ENST00000588477 ARL6IP1Q15041 203 aa11.11□□□□□ -0.63
IFT20-216ENST00000588477 Q56UQ5 140 aa11.11□□□□□ -0.63
IFT20-216ENST00000588477 Q8NAQ8 132 aa11.11□□□□□ -0.63
IFT20-216ENST00000588477 TMEM116Q8NCL8 245 aa11.11□□□□□ -0.63
IFT20-216ENST00000588477 SECTM1Q8WVN6 248 aa11.11□□□□□ -0.63
IFT20-216ENST00000588477 DCSTAMPQ9H295 470 aa11.11□□□□□ -0.63
IFT20-216ENST00000588477 SCN3BQ9NY72 215 aa11.11□□□□□ -0.63
IFT20-216ENST00000588477 IGHV3OR16-13A0A075B7E8 117 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 IGHV3-74A0A0B4J1X5 117 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 TRAV10A0A0B4J240 114 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 IFITM5A6NNB3 132 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 C15orf61A6NNL5 157 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 SULT1C2O00338 296 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 PDCD5O14737 125 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 HPRT1P00492 218 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 TRAPPC2P0DI81 140 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 TRAPPC2BP0DI82 140 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 RBMY1A1P0DJD3 496 aaKnown RBP11.1□□□□□ -0.63
IFT20-216ENST00000588477 RBMY1CP0DJD4 496 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 NQO2P16083 231 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 TAS2R31P59538 309 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 RBMY1FQ15415 496 aaKnown RBP11.1□□□□□ -0.63
IFT20-216ENST00000588477 HACD4Q5VWC8 232 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 PVRIGQ6DKI7 326 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 Q6ZTC4 211 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 DMBX1Q8NFW5 382 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 NUDCD2Q8WVJ2 157 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 CMTM3Q96MX0 182 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 ANXA10Q9UJ72 324 aa11.1□□□□□ -0.63
IFT20-216ENST00000588477 DYNC1H1Q14204 4646 aaKnown RBP11.09□□□□□ -0.63
IFT20-216ENST00000588477 IGHV4-28A0A0C4DH34 117 aa11.09□□□□□ -0.63
IFT20-216ENST00000588477 TEX50A0A1B0GTY4 177 aa11.09□□□□□ -0.63
IFT20-216ENST00000588477 CTSGP08311 255 aa11.09□□□□□ -0.63
IFT20-216ENST00000588477 MLLT11Q13015 90 aaPredicted RBP11.09□□□□□ -0.63
IFT20-216ENST00000588477 POU2AF1Q16633 256 aa11.09□□□□□ -0.63
IFT20-216ENST00000588477 FAM90A2PQ658T7 463 aa11.09□□□□□ -0.63
IFT20-216ENST00000588477 LEMD1Q68G75 181 aa11.09□□□□□ -0.63
IFT20-216ENST00000588477 ZNF773Q6PK81 442 aa11.09□□□□□ -0.63
IFT20-216ENST00000588477 ZNF414Q96IQ9 312 aa11.09□□□□□ -0.63
IFT20-216ENST00000588477 ACOT13Q9NPJ3 140 aa11.09□□□□□ -0.63
IFT20-216ENST00000588477 TMEM140Q9NV12 185 aa11.09□□□□□ -0.63
IFT20-216ENST00000588477 F11RQ9Y624 299 aaKnown RBP11.09□□□□□ -0.63
IFT20-216ENST00000588477 TMEM235A6NFC5 223 aa11.08□□□□□ -0.64
IFT20-216ENST00000588477 K7EIM0 57 aa11.08□□□□□ -0.64
IFT20-216ENST00000588477 RBFOX2O43251 390 aaKnown RBP eCLIP11.08□□□□□ -0.64
IFT20-216ENST00000588477 YIF1AO95070 293 aa11.08□□□□□ -0.64
IFT20-216ENST00000588477 PAFAH1B2P68402 229 aa11.08□□□□□ -0.64
IFT20-216ENST00000588477 THOC7Q6I9Y2 204 aaKnown RBP11.08□□□□□ -0.64
IFT20-216ENST00000588477 HSD17B13Q7Z5P4 300 aaPredicted RBP11.08□□□□□ -0.64
IFT20-216ENST00000588477 CENPSQ8N2Z9 138 aa11.08□□□□□ -0.64
IFT20-216ENST00000588477 POM121L12Q8N7R1 296 aa11.08□□□□□ -0.64
IFT20-216ENST00000588477 HINT2Q9BX68 163 aa11.08□□□□□ -0.64
IFT20-216ENST00000588477 TRAV14DV4A0A0A6YYC5 116 aa11.07□□□□□ -0.64
IFT20-216ENST00000588477 TRAV1-2A0A0B4J238 106 aa11.07□□□□□ -0.64
IFT20-216ENST00000588477 PTHLHP12272 177 aa11.07□□□□□ -0.64
IFT20-216ENST00000588477 RAB3BP20337 219 aa11.07□□□□□ -0.64
IFT20-216ENST00000588477 FCGR2CP31995 323 aa11.07□□□□□ -0.64
IFT20-216ENST00000588477 GNG2P59768 71 aa11.07□□□□□ -0.64
IFT20-216ENST00000588477 DEFB131AP59861 70 aa11.07□□□□□ -0.64
IFT20-216ENST00000588477 RELQ04864 619 aaPredicted RBP11.07□□□□□ -0.64
IFT20-216ENST00000588477 CATR1Q13166 79 aa11.07□□□□□ -0.64
IFT20-216ENST00000588477 TCF24Q7RTU0 167 aa11.07□□□□□ -0.64
IFT20-216ENST00000588477 OR1L8Q8NGR8 309 aa11.07□□□□□ -0.64
IFT20-216ENST00000588477 OR13F1Q8NGS4 319 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms