RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 A0A1B0GU03 582 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 TEX22C9J3V5 150 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 H3BUA1 57 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 CYB5BO43169 146 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 HOXB5P09067 269 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 APELAP0DMC3 54 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 PF4V1P10720 104 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 PPIFP30405 207 aaKnown RBP11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 IZUMO4Q1ZYL8 232 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 C19orf54Q5BKX5 351 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 NMSQ5H8A3 153 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 OR52B4Q8NGK2 314 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 SPATA3Q8NHX4 192 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 WIPF2Q8TF74 440 aaPredicted RBP11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 GPR146Q96CH1 333 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 SEC22CQ9BRL7 303 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 PLEKHA3Q9HB20 300 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 NDUFA4L2Q9NRX3 87 aa11.44□□□□□ -0.58
SCAMP4-209ENST00000585335 A0A0G2JRQ6 117 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 TCRBV4S1A1TA0A5B7 111 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 HMX3A6NHT5 357 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 ST8SIA3O43173 380 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 CD28P10747 220 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 SLC25A6P12236 298 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 MYOD1P15172 320 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 SPCS3P61009 180 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 PRCDQ00LT1 54 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 C12orf45Q8N5I9 185 aaPredicted RBP11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 TTC9CQ8N5M4 171 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 C11orf44Q8N8P7 122 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 UXS1Q8NBZ7 420 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 OR5T1Q8NG75 326 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 OR1S1Q8NH92 325 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 CITED1Q99966 193 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 SLA2Q9H6Q3 261 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 ZFP57Q9NU63 452 aa11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 TSSC4Q9Y5U2 329 aaPredicted RBP11.43□□□□□ -0.58
SCAMP4-209ENST00000585335 PLXNB1O43157 2135 aa11.42□□□□□ -0.58
SCAMP4-209ENST00000585335 NPIPB5A8MRT5 1133 aa11.42□□□□□ -0.58
SCAMP4-209ENST00000585335 SNRPGP15A8MWD9 76 aa11.42□□□□□ -0.58
SCAMP4-209ENST00000585335 IGLV1-40P01703 118 aa11.42□□□□□ -0.58
SCAMP4-209ENST00000585335 DEFA4P12838 97 aa11.42□□□□□ -0.58
SCAMP4-209ENST00000585335 PSMB6P28072 239 aa11.42□□□□□ -0.58
SCAMP4-209ENST00000585335 HOXA1P49639 335 aaPredicted RBP11.42□□□□□ -0.58
SCAMP4-209ENST00000585335 ERHP84090 104 aaKnown RBP11.42□□□□□ -0.58
SCAMP4-209ENST00000585335 GGNBP1Q5YKI7 109 aa11.42□□□□□ -0.58
SCAMP4-209ENST00000585335 C10orf99Q6UWK7 81 aa11.42□□□□□ -0.58
SCAMP4-209ENST00000585335 NDUFA11Q86Y39 141 aa11.42□□□□□ -0.58
SCAMP4-209ENST00000585335 OR52E5Q8NH55 327 aa11.42□□□□□ -0.58
SCAMP4-209ENST00000585335 TNCP24821 2201 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 IGLC7A0M8Q6 106 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 DBX1A6NMT0 343 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 CEBPZOSA8MTT3 80 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 OR13C7P0DN81 318 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 AREGP15514 252 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 SPNP16150 400 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 HIST1H1BP16401 226 aaKnown RBP11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 PSMB8P28062 276 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 TPPP2P59282 170 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 KRTAP10-3P60369 221 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 CD83Q01151 205 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 AARDQ4LEZ3 155 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 ASPHD1Q5U4P2 390 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 Q6ZRM9 215 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 RNF152Q8N8N0 203 aa11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 CITED2Q99967 270 aaPredicted RBP11.41□□□□□ -0.58
SCAMP4-209ENST00000585335 A0A0G2JLM5 398 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 A0A1B0GW64 132 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 CGB1A6NKQ9 187 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 NUDT19A8MXV4 375 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 E7EUB6 86 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 SOX15O60248 233 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 ADAP1O75689 374 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 BRI3O95415 125 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 TRGV3P03979 118 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 CRYGCP07315 174 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 SNCAP37840 140 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 RAB9AP51151 201 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 SRSF4Q08170 494 aaKnown RBP11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 OR10W1Q8NGF6 305 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 OR1L6Q8NGR2 347 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 MS4A10Q96PG2 267 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 COL6A5A8TX70 2615 aa11.4□□□□□ -0.58
SCAMP4-209ENST00000585335 C13orf42A0A1B0GVH6 325 aa11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 FAM223BA6NKX1 122 aa11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 FAM90A26D6RGX4 464 aa11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 SSNA1O43805 119 aa11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 MED6O75586 246 aa11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 RPLP1P05386 114 aaKnown RBP11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 REG1AP05451 166 aa11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 CTRB1P17538 263 aa11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 SUB1P53999 127 aaKnown RBP eCLIP11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 RPL23AP62750 156 aaKnown RBP11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 TNFRSF9Q07011 255 aa11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 TATDN3Q17R31 274 aa11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 C2orf68Q2NKX9 166 aa11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 NSUN5P1Q3KNT7 163 aa11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 PDLIM3Q53GG5 364 aaPredicted RBP11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 TCTEX1D4Q5JR98 221 aa11.39□□□□□ -0.59
SCAMP4-209ENST00000585335 CTRB2Q6GPI1 263 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms