RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 MRPS10P82664 201 aaKnown RBP9.45□□□□□ -0.9
SS18-225ENST00000585121 RGS21Q2M5E4 152 aa9.45□□□□□ -0.9
SS18-225ENST00000585121 LCN12Q6JVE5 192 aa9.45□□□□□ -0.9
SS18-225ENST00000585121 SGPP2Q8IWX5 399 aa9.45□□□□□ -0.9
SS18-225ENST00000585121 SLC38A6Q8IZM9 456 aa9.45□□□□□ -0.9
SS18-225ENST00000585121 Q8N402 240 aa9.45□□□□□ -0.9
SS18-225ENST00000585121 OR1L8Q8NGR8 309 aa9.45□□□□□ -0.9
SS18-225ENST00000585121 CXorf58Q96LI9 332 aa9.45□□□□□ -0.9
SS18-225ENST00000585121 FANCD2OSQ96PS1 177 aa9.45□□□□□ -0.9
SS18-225ENST00000585121 ABHD1Q96SE0 405 aa9.45□□□□□ -0.9
SS18-225ENST00000585121 THYN1Q9P016 225 aa9.45□□□□□ -0.9
SS18-225ENST00000585121 TRAV3A0A0B4J244 114 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 A0A1B0GW64 132 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 NDUFB8O95169 186 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 KRASP01116 189 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 REG1AP05451 166 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 CSN3P07498 182 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 TRAPPC2P0DI81 140 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 TRAPPC2BP0DI82 140 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 IL7P13232 177 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 BAK1Q16611 211 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 FAM106AQ4KMX7 169 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 PHLDA2Q53GA4 152 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 IL34Q6ZMJ4 242 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 C19orf35Q6ZS72 473 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 HSD17B13Q7Z5P4 300 aaPredicted RBP9.44□□□□□ -0.9
SS18-225ENST00000585121 OR2K2Q8NGT1 345 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 FKBP11Q9NYL4 201 aa9.44□□□□□ -0.9
SS18-225ENST00000585121 TRBV7-1A0A0A6YYK4 115 aa9.43□□□□□ -0.9
SS18-225ENST00000585121 PPP5D1E7EU14 171 aa9.43□□□□□ -0.9
SS18-225ENST00000585121 GSTZ1O43708 216 aaPredicted RBP9.43□□□□□ -0.9
SS18-225ENST00000585121 IGHV3-23P01764 117 aa9.43□□□□□ -0.9
SS18-225ENST00000585121 ARL3P36405 182 aa9.43□□□□□ -0.9
SS18-225ENST00000585121 UCP3P55916 312 aa9.43□□□□□ -0.9
SS18-225ENST00000585121 RNASE12Q5GAN4 147 aaKnown RBP9.43□□□□□ -0.9
SS18-225ENST00000585121 RNASE10Q5GAN6 216 aaKnown RBP9.43□□□□□ -0.9
SS18-225ENST00000585121 CLEC19AQ6UXS0 136 aa9.43□□□□□ -0.9
SS18-225ENST00000585121 GTSCR1Q86UQ5 136 aa9.43□□□□□ -0.9
SS18-225ENST00000585121 CADM3Q8N126 398 aa9.43□□□□□ -0.9
SS18-225ENST00000585121 DYNLRB2Q8TF09 96 aa9.43□□□□□ -0.9
SS18-225ENST00000585121 FCAMRQ8WWV6 532 aa9.43□□□□□ -0.9
SS18-225ENST00000585121 THAP7Q9BT49 309 aaPredicted RBP9.43□□□□□ -0.9
SS18-225ENST00000585121 HINT2Q9BX68 163 aa9.43□□□□□ -0.9
SS18-225ENST00000585121 FAM212BQ9NTI7 297 aaPredicted RBP9.43□□□□□ -0.9
SS18-225ENST00000585121 PRNDQ9UKY0 176 aa9.43□□□□□ -0.9
SS18-225ENST00000585121 IGLV11-55A0A075B6I3 123 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 TEX50A0A1B0GTY4 177 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 IGLC7A0M8Q6 106 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 GABARAPH6UMI1 98 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 M0QYG6 137 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 OR2C1O95371 312 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 FRMD6-AS1P0C7T7 363 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 OR13C7P0DN81 318 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 PGAM2P15259 253 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 TBPP20226 339 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 G6PCP35575 357 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 KLK9Q2XQG4 91 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 TRIQKQ629K1 86 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 TBC1D26Q86UD7 250 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 TMEM56Q96MV1 263 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 ZMAT4Q9H898 229 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 KLK11Q9UBX7 282 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 KLK9Q9UKQ9 250 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 OR51B2Q9Y5P1 312 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 TENM3Q9P273 2699 aa9.42□□□□□ -0.9
SS18-225ENST00000585121 CGB1A6NKQ9 187 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 LGALS9O00182 355 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 SERPINE2P07093 398 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 ZNF585BQ52M93 769 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 SLC25A24Q6NUK1 477 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 GPHB5Q86YW7 130 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 ARRDC1Q8N5I2 433 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 OR52I2Q8NH67 350 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 SMIM4Q8WVI0 70 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 LSM10Q969L4 123 aaKnown RBP9.41□□□□□ -0.9
SS18-225ENST00000585121 TUBA4BQ9H853 241 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 MTFP1Q9UDX5 166 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 S4R3C0 116 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 ZNF320A2RRD8 509 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 PTTG1O95997 202 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 HLA-AP01891 365 aaKnown RBP9.41□□□□□ -0.9
SS18-225ENST00000585121 CD3DP04234 171 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 CLEC3BP05452 202 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 IGHV4-30-4P0DP06 118 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 INPP1P49441 399 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 MECP2P51608 486 aaKnown RBP9.41□□□□□ -0.9
SS18-225ENST00000585121 ASAH1Q13510 395 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 OXA1LQ15070 435 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 H2BFWTQ7Z2G1 175 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 SBSPONQ8IVN8 264 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 OR10W1Q8NGF6 305 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 OR1L6Q8NGR2 347 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 OR5B3Q8NH48 314 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 OR4A16Q8NH70 328 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 ZNF486Q96H40 463 aaPredicted RBP9.41□□□□□ -0.9
SS18-225ENST00000585121 CCDC140Q96MF4 163 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 NDUFA4L2Q9NRX3 87 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 TECRQ9NZ01 308 aaKnown RBP9.41□□□□□ -0.9
SS18-225ENST00000585121 NSG2Q9Y328 171 aa9.41□□□□□ -0.9
SS18-225ENST00000585121 C2orf70A6NJV1 201 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms